Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.31□□□□□ -1.56
ERCC4Q92889 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.31□□□□□ -1.56
ERCC4Q92889 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ERCC4Q92889 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 RNU5F-7P-201ENST00000363696 115 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 RNU6-867P-201ENST00000364956 107 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ERCC4Q92889 RNU6-178P-201ENST00000384631 104 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 HMGB1P11-201ENST00000413899 637 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC4Q92889 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC4Q92889 AL139415.2-201ENST00000431968 163 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC010881.1-201ENST00000433830 235 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 RPL7P31-201ENST00000450192 724 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC4Q92889 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC4Q92889 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 LARP1BP2-201ENST00000486594 519 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.31□□□□□ -1.56
ERCC4Q92889 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC021678.1-201ENST00000505195 936 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC116353.2-201ENST00000505332 712 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 STMN1P2-201ENST00000508435 439 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC091133.4-201ENST00000511142 308 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 BTF3P13-201ENST00000513224 490 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 PAICSP4-201ENST00000517543 1253 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.31□□□□□ -1.56
ERCC4Q92889 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.31□□□□□ -1.56
ERCC4Q92889 GSTP1P1-201ENST00000548078 319 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC090502.2-201ENST00000549267 280 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC133555.2-201ENST00000550213 292 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC4Q92889 AC092325.1-201ENST00000566449 554 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 AC141257.3-201ENST00000572906 215 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 RN7SL802P-201ENST00000577858 299 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AC090312.1-201ENST00000580637 348 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC4Q92889 AC022726.1-201ENST00000587475 207 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 AL445222.1-201ENST00000607259 628 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.31□□□□□ -1.56
ERCC4Q92889 AP002799.1-201ENST00000623552 423 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.31□□□□□ -1.56
ERCC4Q92889 CRYM-AS1-204ENST00000637983 556 ntBASIC5.31□□□□□ -1.56
ERCC4Q92889 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.31□□□□□ -1.56
ERCC4Q92889 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
ERCC4Q92889 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.3□□□□□ -1.56
ERCC4Q92889 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC4Q92889 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 SAMMSON-226ENST00000642089 1582 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ERCC4Q92889 PHKBP1-201ENST00000450951 1951 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC016716.1-201ENST00000265882 708 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 RNA5SP191-201ENST00000362585 102 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 RN7SKP226-201ENST00000364912 300 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC4Q92889 RNU6-657P-201ENST00000383904 107 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AL590762.2-201ENST00000395798 571 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC025750.1-201ENST00000399891 379 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.3□□□□□ -1.56
ERCC4Q92889 RN7SKP167-201ENST00000411047 285 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 RNU6-603P-201ENST00000411403 107 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC109780.2-201ENST00000413467 845 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ERCC4Q92889 CHEK2P3-201ENST00000416118 248 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 RPL30P16-201ENST00000419341 429 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC4Q92889 Z74021.1-201ENST00000423610 407 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 SDCBPP2-201ENST00000424643 885 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.3□□□□□ -1.56
ERCC4Q92889 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC4Q92889 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC4Q92889 RPS26P47-201ENST00000427219 348 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 AL596276.1-201ENST00000434465 418 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 GEMIN8P3-201ENST00000445417 720 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.3□□□□□ -1.56
ERCC4Q92889 PAXBP1P1-201ENST00000449315 447 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.3□□□□□ -1.56
ERCC4Q92889 AC079168.2-201ENST00000453977 416 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC005008.1-201ENST00000456151 612 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 KLF3P2-201ENST00000465138 268 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 MTND6P6-201ENST00000478031 263 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.3□□□□□ -1.56
ERCC4Q92889 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms