Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 AL136116.1-201ENST00000403591 381 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 RPL23AP47-201ENST00000408017 460 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 RHEBP3-201ENST00000411920 351 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC3Q92529 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 ARF4P2-201ENST00000430209 526 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 AC007389.2-201ENST00000434630 306 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 VN1R34P-201ENST00000447387 883 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 RPL7P52-201ENST00000449200 742 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 RN7SL542P-201ENST00000467147 294 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHC3Q92529 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.8□□□□□ -1.8
SHC3Q92529 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 RNU2-27P-201ENST00000516185 142 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 SNORA48.9-201ENST00000516419 162 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.8□□□□□ -1.8
SHC3Q92529 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC3Q92529 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.8□□□□□ -1.8
SHC3Q92529 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC3Q92529 CR383656.14-201ENST00000551951 406 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC3Q92529 DUXAP6-201ENST00000553858 601 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 GTF2IP22-201ENST00000554443 182 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC3Q92529 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC3Q92529 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC3Q92529 AL121772.2-201ENST00000614331 297 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 AC006133.1-201ENST00000617106 264 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHC3Q92529 AL356490.1-201ENST00000623079 479 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.8□□□□□ -1.8
SHC3Q92529 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHC3Q92529 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHC3Q92529 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHC3Q92529 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SHC3Q92529 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHC3Q92529 ZNF734P-201ENST00000419494 1534 ntBASIC3.8□□□□□ -1.8
SHC3Q92529 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHC3Q92529 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.79□□□□□ -1.8
SHC3Q92529 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC3Q92529 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHC3Q92529 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC3Q92529 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 RNU6-1151P-201ENST00000384684 107 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 MIR591-201ENST00000385290 95 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHC3Q92529 RNU6ATAC-201ENST00000408749 126 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.79□□□□□ -1.8
SHC3Q92529 RPS3AP9-201ENST00000417027 792 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 TOMM22P1-201ENST00000418578 312 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 DBIP2-201ENST00000419076 262 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.79□□□□□ -1.8
SHC3Q92529 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.79□□□□□ -1.8
SHC3Q92529 PTP4A1P3-201ENST00000433661 420 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 MTND1P33-201ENST00000446251 917 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.79□□□□□ -1.8
SHC3Q92529 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC3Q92529 snoU13.3-201ENST00000459441 104 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 RPL7L1P8-201ENST00000469911 741 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 AC023598.1-201ENST00000472521 361 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.79□□□□□ -1.8
SHC3Q92529 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 RNU6-202P-201ENST00000515998 96 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 RN7SKP289-201ENST00000517244 295 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.79□□□□□ -1.8
SHC3Q92529 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.79□□□□□ -1.8
SHC3Q92529 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC3Q92529 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.79□□□□□ -1.8
SHC3Q92529 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC3Q92529 AC005972.3-201ENST00000606304 481 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 AL590282.1-201ENST00000610379 1136 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC3Q92529 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC3Q92529 AL136164.4-201ENST00000625013 2135 ntBASIC3.79□□□□□ -1.8
SHC3Q92529 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHC3Q92529 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.78□□□□□ -1.8
SHC3Q92529 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.78□□□□□ -1.8
SHC3Q92529 RPS4XP5-202ENST00000449995 1334 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 RNA5SP124-201ENST00000362739 110 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 RNU6-374P-201ENST00000364146 108 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SHC3Q92529 MT-TC-201ENST00000387405 66 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 MIR670-201ENST00000390142 98 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 ATP5F1P3-201ENST00000397213 657 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.78□□□□□ -1.8
SHC3Q92529 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.78□□□□□ -1.8
SHC3Q92529 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.78□□□□□ -1.8
SHC3Q92529 AC068533.1-201ENST00000418542 415 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 AC008280.1-201ENST00000418851 412 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
SHC3Q92529 CYCSP4-201ENST00000429682 331 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.78□□□□□ -1.8
SHC3Q92529 MTND4LP7-201ENST00000431728 294 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 AL590103.1-201ENST00000434488 307 ntBASIC3.78□□□□□ -1.8
SHC3Q92529 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms