Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 AC106872.2-201ENST00000494303 480 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 CDV3-208ENST00000511392 554 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 AC093303.1-201ENST00000514549 295 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 MTCO2P24-201ENST00000515611 426 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 RNU6-1271P-201ENST00000517049 105 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 PTP4A1P6-201ENST00000531034 478 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 AL669831.4-202ENST00000590817 238 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 BX664608.1-201ENST00000610519 487 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 uc_338.15-201ENST00000615470 191 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 AC135068.12-201ENST00000637370 931 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 DCN-218ENST00000551354 2924 ntTSL 3 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 OR9K1P-202ENST00000641111 3217 ntBASIC9.42□□□□□ -0.9
TRIM41Q8WV44 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM41Q8WV44 AL034546.1-201ENST00000623740 3693 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC006020.1-201ENST00000420179 1854 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 Y_RNA.28-201ENST00000362554 111 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 Y_RNA.255-201ENST00000364581 97 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 RNU6-1137P-201ENST00000517073 99 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 RNU6-1220P-201ENST00000517126 108 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC121334.2-201ENST00000605387 271 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 OR10AB1P-201ENST00000609613 938 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 HMGB1P24-202ENST00000615653 685 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 U4.1-201ENST00000620349 87 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC114546.3-201ENST00000623582 1734 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 LCMT1-AS2-202ENST00000565214 5666 ntBASIC9.41□□□□□ -0.9
TRIM41Q8WV44 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TRIM41Q8WV44 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 INTS6P1-201ENST00000504674 2530 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 RNU4-2-201ENST00000365668 141 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AL009179.1-201ENST00000406085 265 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 MIR1302-3-201ENST00000408128 138 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC008280.1-201ENST00000418851 412 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 UQCRBP1-201ENST00000421129 336 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 GPR143P-201ENST00000434155 205 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 RPS4XP10-201ENST00000465034 731 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 MTATP8P1-201ENST00000467115 207 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 RNU6-201P-201ENST00000517100 61 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC123904.2-201ENST00000548059 300 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 MRPS21P9-201ENST00000571150 257 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC090312.1-201ENST00000580637 348 ntBASIC9.4□□□□□ -0.9
TRIM41Q8WV44 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
TRIM41Q8WV44 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
TRIM41Q8WV44 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TRIM41Q8WV44 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
TRIM41Q8WV44 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
TRIM41Q8WV44 RNF6P1-201ENST00000444889 1784 ntBASIC9.4□□□□□ -0.91
TRIM41Q8WV44 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM41Q8WV44 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC9.39□□□□□ -0.91
TRIM41Q8WV44 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC9.39□□□□□ -0.91
TRIM41Q8WV44 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM41Q8WV44 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
TRIM41Q8WV44 Y_RNA.476-201ENST00000384347 108 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms