Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC011493.1-201ENST00000596753 1632 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AC006020.1-201ENST00000420179 1854 ntBASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHKBP1Q8TBC3 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.71□□□□□ -1.49
SHKBP1Q8TBC3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
SHKBP1Q8TBC3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHKBP1Q8TBC3 AC068870.1-201ENST00000563737 2455 ntBASIC5.71□□□□□ -1.49
SHKBP1Q8TBC3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHKBP1Q8TBC3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-666P-201ENST00000363499 107 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.148-201ENST00000363557 117 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 SNORA67-201ENST00000384423 137 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 NPM1P38-201ENST00000403835 865 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AL591416.1-201ENST00000404015 867 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.615-201ENST00000410769 117 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 RPSAP35-201ENST00000413753 818 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 CHEK2P3-201ENST00000416118 248 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AL807761.1-201ENST00000417622 171 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 RNF10P1-201ENST00000418589 369 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 MTCYBP10-201ENST00000424905 650 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 RPL12P3-201ENST00000440080 396 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 BX284632.1-201ENST00000478218 541 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC015724.1-201ENST00000478577 156 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AL035404.1-201ENST00000497982 568 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC002456.2-201ENST00000509356 380 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 RPL10P14-201ENST00000565265 298 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AP005403.1-201ENST00000579720 229 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 Z69720.2-201ENST00000624755 279 ntBASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHKBP1Q8TBC3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.46-201ENST00000362695 102 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP185-201ENST00000362813 326 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.112-201ENST00000363250 102 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP145-201ENST00000363291 303 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-289P-201ENST00000364093 107 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RNU1-43P-201ENST00000365052 165 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 DEFB109C-201ENST00000382575 264 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 DEFB109B-201ENST00000382656 264 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RNU1-136P-201ENST00000384181 164 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-532P-201ENST00000384318 107 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 MTCYBP4-201ENST00000401524 249 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 BTBD10P2-201ENST00000404779 676 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 DUTP5-201ENST00000406790 469 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RNA5SP498-201ENST00000411342 120 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC104837.2-201ENST00000427236 424 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC138761.5-201ENST00000433967 325 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 GSTM5P1-201ENST00000434751 660 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AL356276.2-201ENST00000435919 558 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC092809.1-201ENST00000441469 474 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RPS24P6-201ENST00000452670 400 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 COX6B1P2-201ENST00000489624 230 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC025164.1-201ENST00000496249 478 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-201P-201ENST00000517100 61 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AP003072.2-201ENST00000527756 676 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms