Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 RNA5SP282-201ENST00000516355 108 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC087276.1-201ENST00000529659 480 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AL355836.1-201ENST00000555951 870 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 OR2AS2P-201ENST00000606902 342 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AP004607.9-201ENST00000618202 316 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS8Q8N3P4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS8Q8N3P4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS8Q8N3P4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS8Q8N3P4 U3.12-201ENST00000364498 214 ntBASIC4.28□□□□□ -1.72
VPS8Q8N3P4 SNORA9.3-201ENST00000516383 129 ntBASIC4.28□□□□□ -1.72
VPS8Q8N3P4 AP000857.1-201ENST00000532151 543 ntBASIC4.28□□□□□ -1.72
VPS8Q8N3P4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS8Q8N3P4 HMGB1P6-201ENST00000569046 646 ntBASIC4.28□□□□□ -1.72
VPS8Q8N3P4 MIR3605-201ENST00000583214 100 ntBASIC4.28□□□□□ -1.72
VPS8Q8N3P4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 AL139039.1-201ENST00000401900 692 ntBASIC4.27□□□□□ -1.73
VPS8Q8N3P4 MRPL50P2-201ENST00000416821 482 ntBASIC4.27□□□□□ -1.73
VPS8Q8N3P4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 AL357520.1-201ENST00000441557 453 ntBASIC4.27□□□□□ -1.73
VPS8Q8N3P4 AL662791.1-201ENST00000441992 928 ntBASIC4.27□□□□□ -1.73
VPS8Q8N3P4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 RPL21P8-201ENST00000465083 535 ntBASIC4.27□□□□□ -1.73
VPS8Q8N3P4 PDCL2P2-201ENST00000533651 189 ntBASIC4.27□□□□□ -1.73
VPS8Q8N3P4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 AP003485.2-201ENST00000623636 610 ntBASIC4.27□□□□□ -1.73
VPS8Q8N3P4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
VPS8Q8N3P4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 RNU2-52P-201ENST00000410680 190 ntBASIC4.26□□□□□ -1.73
VPS8Q8N3P4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AC063976.3-201ENST00000426849 329 ntBASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AP000936.2-201ENST00000447151 681 ntBASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 CR381653.2-201ENST00000624041 768 ntBASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AC024023.1-201ENST00000624530 922 ntBASIC4.26□□□□□ -1.73
VPS8Q8N3P4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS8Q8N3P4 AC008264.2-201ENST00000610193 3731 ntBASIC4.26□□□□□ -1.73
VPS8Q8N3P4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS8Q8N3P4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS8Q8N3P4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.25□□□□□ -1.73
VPS8Q8N3P4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS8Q8N3P4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS8Q8N3P4 AC011037.1-201ENST00000483964 558 ntBASIC4.25□□□□□ -1.73
VPS8Q8N3P4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS8Q8N3P4 AL450489.1-201ENST00000612071 468 ntBASIC4.25□□□□□ -1.73
VPS8Q8N3P4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS8Q8N3P4 MIR1183-201ENST00000408856 89 ntBASIC4.24□□□□□ -1.73
VPS8Q8N3P4 AL356806.1-201ENST00000422524 916 ntBASIC4.24□□□□□ -1.73
VPS8Q8N3P4 ARL5AP4-201ENST00000430731 512 ntBASIC4.24□□□□□ -1.73
VPS8Q8N3P4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS8Q8N3P4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS8Q8N3P4 CACYBPP2-201ENST00000453625 678 ntBASIC4.24□□□□□ -1.73
VPS8Q8N3P4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.24□□□□□ -1.73
VPS8Q8N3P4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS8Q8N3P4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS8Q8N3P4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS8Q8N3P4 AC109315.1-201ENST00000584143 1347 ntBASIC4.24□□□□□ -1.73
VPS8Q8N3P4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS8Q8N3P4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 SNORA48.8-201ENST00000391324 134 ntBASIC4.23□□□□□ -1.73
VPS8Q8N3P4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AC004987.3-201ENST00000413879 771 ntBASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AP005205.1-201ENST00000563503 508 ntBASIC4.23□□□□□ -1.73
VPS8Q8N3P4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AL139286.1-201ENST00000604465 483 ntBASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AC007998.5-201ENST00000622938 237 ntBASIC4.23□□□□□ -1.73
VPS8Q8N3P4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS8Q8N3P4 AL606537.1-201ENST00000607258 2011 ntBASIC4.23□□□□□ -1.73
VPS8Q8N3P4 YPEL5P1-201ENST00000419731 367 ntBASIC4.22□□□□□ -1.73
VPS8Q8N3P4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 AL590399.6-201ENST00000446396 307 ntBASIC4.22□□□□□ -1.73
VPS8Q8N3P4 RPL31P50-201ENST00000471002 296 ntBASIC4.22□□□□□ -1.73
VPS8Q8N3P4 AL133271.1-201ENST00000538229 291 ntBASIC4.22□□□□□ -1.73
VPS8Q8N3P4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms