Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 LSM6P2-201ENST00000552208 177 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC087763.1-201ENST00000603391 286 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC087045.1-201ENST00000605856 382 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC093788.1-201ENST00000609356 927 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 OR10AB1P-201ENST00000609613 938 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AP003122.6-201ENST00000623831 495 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 HSPA8P18-201ENST00000439846 1928 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 NUP58P1-201ENST00000502546 1738 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 MTND4P23-201ENST00000447723 1363 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 RNU4-76P-201ENST00000364509 141 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 RNU1-106P-201ENST00000384382 164 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AL645927.1-201ENST00000396783 406 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 DPPA2P2-201ENST00000418220 897 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 RWDD4P2-201ENST00000426392 563 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 GTF2IP20-201ENST00000431663 360 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 CEACAMP9-201ENST00000442990 513 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 CBX1P2-201ENST00000453841 458 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 RN7SL329P-201ENST00000467740 299 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC004453.1-201ENST00000487895 408 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC023194.1-201ENST00000493084 308 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 RN7SL808P-201ENST00000496066 299 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 Vault.3-201ENST00000516676 95 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 snoU109.6-201ENST00000516831 118 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 RN7SKP260-201ENST00000516907 149 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 HSPA8P13-201ENST00000523715 472 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 CBX3P5-201ENST00000552017 521 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC087283.1-201ENST00000604029 1074 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC009159.1-201ENST00000618386 642 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC068722.2-201ENST00000618734 544 ntBASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM48Q8IWZ4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 AL442128.2-201ENST00000620246 1824 ntBASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM48Q8IWZ4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 NMD3P1-201ENST00000439704 1488 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC092125.1-201ENST00000562568 1995 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RNU5E-1-201ENST00000362477 120 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RNA5SP305-201ENST00000362665 119 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 U3.3-201ENST00000362986 216 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 Y_RNA.86-201ENST00000363020 111 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RNU1-146P-201ENST00000364015 165 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms