Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MTND4P8-201ENST00000514997 1362 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AL121972.1-201ENST00000402023 252 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MTCO3P31-201ENST00000405526 789 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AL513174.1-201ENST00000423182 629 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MTND4LP14-201ENST00000429447 288 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC097713.2-201ENST00000430199 356 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MTND4LP7-201ENST00000431728 294 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 SKP1P1-201ENST00000438081 489 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 UBE2V1P5-201ENST00000440070 405 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 HMGB3P8-201ENST00000449709 577 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 CYCSP35-201ENST00000451978 304 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 RPL5P24-201ENST00000463742 885 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 RPL21P104-201ENST00000464143 478 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AL049830.2-201ENST00000480072 201 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC008565.1-201ENST00000509046 885 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC008885.2-201ENST00000509506 930 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AP000926.4-201ENST00000527351 454 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC007458.1-201ENST00000542812 373 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MTCYBP28-201ENST00000566728 1132 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 SRGNP1-201ENST00000603392 451 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 ELOCP35-201ENST00000604289 336 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC006077.1-201ENST00000604746 343 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC007179.3-201ENST00000604976 235 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 BRDTP1-201ENST00000605735 677 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC020658.4-201ENST00000613987 684 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC018926.3-201ENST00000618841 406 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AC092628.2-201ENST00000622492 339 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 AP003355.3-201ENST00000623465 114 ntBASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.3□□□□□ -1.88
H3F3CQ6NXT2 MTND5P28-201ENST00000438005 1594 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC107081.3-201ENST00000612715 2034 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC138915.3-201ENST00000562908 1389 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC046144.1-201ENST00000478559 1853 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RNA5SP50-201ENST00000363731 107 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RN7SKP111-201ENST00000410349 271 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RNU2-71P-201ENST00000411395 189 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RPL21P109-201ENST00000422213 475 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RPL21P66-201ENST00000426566 466 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AL590103.1-201ENST00000434488 307 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 Z99714.1-201ENST00000450463 807 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 U3.44-201ENST00000458938 192 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC093663.2-201ENST00000484625 313 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RN7SKP289-201ENST00000517244 295 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AL389895.1-201ENST00000554127 252 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms