Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DPH3P2-201ENST00000422618 250 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC119618.1-201ENST00000434191 222 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 FABP5P14-201ENST00000437273 393 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC006512.1-201ENST00000468816 291 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC007686.1-201ENST00000488511 463 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 TRBV5-2-201ENST00000489095 273 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 RNY3P15-201ENST00000516297 97 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC087854.1-201ENST00000519706 414 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 SUMO2P20-201ENST00000520803 283 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AP001804.2-201ENST00000533932 910 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 IMMP1LP2-201ENST00000552954 492 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 CYCSP1-201ENST00000604815 315 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC018889.1-201ENST00000605372 397 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC018926.3-201ENST00000618841 406 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 ZNF652P1-201ENST00000442420 1309 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7□□□□□ -1.29
RC3H1Q5TC82 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
RC3H1Q5TC82 AC114947.2-201ENST00000565748 2125 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
RC3H1Q5TC82 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
RC3H1Q5TC82 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 RNU6-522P-201ENST00000364497 107 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 RNU6-1040P-201ENST00000383974 107 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 RNU6-38P-201ENST00000384085 107 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 RPL6P29-201ENST00000414863 865 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC007283.2-201ENST00000424739 197 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 CRIP1P1-201ENST00000427567 185 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AL049745.1-201ENST00000433953 286 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 PCNPP5-201ENST00000452246 481 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7□□□□□ -1.29
RC3H1Q5TC82 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC7□□□□□ -1.29
RC3H1Q5TC82 RNU6-333P-201ENST00000459117 107 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7□□□□□ -1.29
RC3H1Q5TC82 LIAS-206ENST00000513731 826 ntTSL 5 BASIC7□□□□□ -1.29
RC3H1Q5TC82 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7□□□□□ -1.29
RC3H1Q5TC82 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7□□□□□ -1.29
RC3H1Q5TC82 RNU6-714P-201ENST00000516963 103 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC7□□□□□ -1.29
RC3H1Q5TC82 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC7□□□□□ -1.29
RC3H1Q5TC82 AC127381.1-201ENST00000555979 939 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7□□□□□ -1.29
RC3H1Q5TC82 AC113195.1-201ENST00000579952 141 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC069061.3-201ENST00000582254 823 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 AF038458.1-201ENST00000588406 262 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AL683813.2-201ENST00000605245 502 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 FAM25E-202ENST00000608562 189 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC020634.1-201ENST00000608701 549 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 MIR6810-201ENST00000622701 70 ntBASIC7□□□□□ -1.29
RC3H1Q5TC82 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
RC3H1Q5TC82 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7□□□□□ -1.29
RC3H1Q5TC82 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7□□□□□ -1.29
RC3H1Q5TC82 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7□□□□□ -1.29
RC3H1Q5TC82 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 API5P2-201ENST00000397055 1498 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 PNPT1P2-201ENST00000456768 2050 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 RPL32P3-201ENST00000359025 275 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 U3.12-201ENST00000364498 214 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 RNU6-532P-201ENST00000384318 107 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 RNA5SP91-201ENST00000390902 119 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms