Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 RNU6-761P-201ENST00000384148 107 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 Y_RNA.493-201ENST00000384422 102 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 MTND4P20-201ENST00000424125 869 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AL035407.1-201ENST00000429211 571 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 DDX39BP2-208ENST00000453923 258 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC092324.1-201ENST00000468671 324 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 RPL12P20-201ENST00000475538 479 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC104685.1-201ENST00000502445 371 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC007016.1-201ENST00000512110 244 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC015795.1-201ENST00000513669 327 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 MIR5186-201ENST00000577504 120 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC090181.2-201ENST00000602975 672 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 AL133507.1-201ENST00000605269 557 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 OR6R2P-201ENST00000609216 300 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 MIR6748-201ENST00000610433 71 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC091953.3-201ENST00000623220 236 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 AC079228.1-201ENST00000624774 1049 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 NXPH1-205ENST00000602349 1953 ntBASIC4.61□□□□□ -1.67
CCDC38Q502W7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC38Q502W7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC38Q502W7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC090337.1-201ENST00000579651 2074 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC021146.4-201ENST00000309229 279 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 MIR3074-201ENST00000384885 81 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 DHFRP6-201ENST00000401776 268 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AL121972.1-201ENST00000402023 252 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 RN7SKP106-201ENST00000410832 272 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 RAD23BP1-201ENST00000421404 1227 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC011233.1-201ENST00000422812 283 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 GLRXP1-201ENST00000423261 334 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AL593851.1-201ENST00000426171 157 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AL360081.1-201ENST00000428299 555 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 BMS1P19-201ENST00000433925 393 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AL591503.2-201ENST00000442314 1005 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 ART2BP-201ENST00000453501 499 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 RPS20P24-201ENST00000457473 361 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 RPS26P15-201ENST00000488067 348 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC010486.2-201ENST00000505572 483 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC239860.2-201ENST00000525886 270 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AL139174.1-201ENST00000531489 886 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC008015.1-201ENST00000555505 465 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 MIR4480-201ENST00000582492 71 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AL669831.4-202ENST00000590817 238 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 VN1R90P-201ENST00000595717 726 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 BPIFA4P-203ENST00000603168 689 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 MIR6820-201ENST00000611508 62 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms