Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 SCARNA24.1-201ENST00000516465 137 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 RN7SKP219-201ENST00000516825 296 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 SNORD116.3-201ENST00000517176 78 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AP001804.2-201ENST00000533932 910 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC068993.1-201ENST00000546724 589 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 MRPS21P7-201ENST00000566937 238 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 MIR1254-2-201ENST00000579553 63 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 RNU4ATAC-201ENST00000580972 127 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 GLUD1P4-201ENST00000590914 418 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC092447.9-201ENST00000603395 144 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 GTF2H2B-203ENST00000508065 1432 ntBASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO4Q2I0M5 AC004972.1-201ENST00000623934 2209 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 SPATA2P1-201ENST00000431223 2055 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 SNORD3E-201ENST00000362899 217 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 Y_RNA.106-201ENST00000363189 100 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RNU6-593P-201ENST00000364716 112 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RNA5SP131-201ENST00000365452 119 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 Y_RNA.376-201ENST00000365638 108 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RNU6-98P-201ENST00000384173 107 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 Y_RNA.485-201ENST00000384395 102 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 ARF4P3-201ENST00000397387 509 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 DSTNP4-201ENST00000399472 474 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RPS4XP9-201ENST00000405151 780 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RNU2-23P-201ENST00000410545 195 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 UBE2FP1-201ENST00000416536 447 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 FTH1P25-201ENST00000447665 469 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC104164.1-201ENST00000460282 590 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RPS3AP41-201ENST00000462701 778 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RPL7P43-201ENST00000478876 753 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RN7SL459P-201ENST00000481078 302 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC068522.1-201ENST00000482895 345 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC009120.1-201ENST00000493458 473 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 BTG4P1-201ENST00000510421 183 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RNU6-1004P-201ENST00000516584 111 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 RNU6-256P-201ENST00000516747 97 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AL118558.2-201ENST00000556294 238 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC130289.1-201ENST00000577321 73 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 MIR3672-201ENST00000584290 82 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC104763.2-201ENST00000604179 382 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AC008013.2-202ENST00000637965 364 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 U6.104-201ENST00000637979 90 ntBASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
RSPO4Q2I0M5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RSPO4Q2I0M5 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO4Q2I0M5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO4Q2I0M5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO4Q2I0M5 AC007114.2-201ENST00000576014 4281 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms