Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RPL23AP93-201ENST00000440847 484 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC004865.1-201ENST00000442276 1003 ntBASIC1.91□□□□□ -2.1
RPS28P62857 MTCO3P17-201ENST00000443775 513 ntBASIC1.91□□□□□ -2.1
RPS28P62857 RANP8-201ENST00000444720 713 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 OR6K5P-201ENST00000447050 945 ntBASIC1.91□□□□□ -2.1
RPS28P62857 NDUFA5P8-201ENST00000449019 346 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC078857.1-201ENST00000469870 667 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC109327.1-201ENST00000471666 403 ntBASIC1.91□□□□□ -2.1
RPS28P62857 PDPN-205ENST00000487038 607 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.91□□□□□ -2.1
RPS28P62857 RN7SL568P-201ENST00000493069 298 ntBASIC1.91□□□□□ -2.1
RPS28P62857 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 AC008427.1-201ENST00000503102 655 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 AC107222.1-201ENST00000510899 637 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 AC104057.1-201ENST00000515547 497 ntBASIC1.91□□□□□ -2.1
RPS28P62857 SNORA74.1-201ENST00000516320 180 ntBASIC1.91□□□□□ -2.1
RPS28P62857 SCARNA13-201ENST00000516672 275 ntBASIC1.91□□□□□ -2.1
RPS28P62857 SNORA31.18-201ENST00000517043 134 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 AP000648.1-201ENST00000529682 397 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC084851.2-201ENST00000530377 364 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC1.91□□□□□ -2.1
RPS28P62857 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC1.91□□□□□ -2.1
RPS28P62857 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 MED28P6-201ENST00000558776 231 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC025281.1-201ENST00000567026 265 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC025627.2-201ENST00000576220 160 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 AC015917.1-201ENST00000579654 510 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.91□□□□□ -2.1
RPS28P62857 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 RPS15AP11-201ENST00000594193 385 ntBASIC1.91□□□□□ -2.1
RPS28P62857 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC1.91□□□□□ -2.1
RPS28P62857 Z93930.3-201ENST00000607919 749 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AP001521.2-201ENST00000608772 546 ntBASIC1.91□□□□□ -2.1
RPS28P62857 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 MIR3653-201ENST00000625572 110 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
RPS28P62857 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 AC080100.1-201ENST00000624239 5356 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 AL513185.3-201ENST00000433335 1300 ntBASIC1.91□□□□□ -2.1
RPS28P62857 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RPS28P62857 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
RPS28P62857 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
RPS28P62857 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.9□□□□□ -2.1
RPS28P62857 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
RPS28P62857 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
RPS28P62857 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPS28P62857 RNU6-173P-201ENST00000364215 104 ntBASIC1.9□□□□□ -2.11
RPS28P62857 SNORA71.2-201ENST00000364941 134 ntBASIC1.9□□□□□ -2.11
RPS28P62857 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC1.9□□□□□ -2.11
RPS28P62857 RNU4-74P-201ENST00000411280 161 ntBASIC1.9□□□□□ -2.11
RPS28P62857 RPS3AP9-201ENST00000417027 792 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC1.9□□□□□ -2.11
RPS28P62857 MTCO3P30-201ENST00000426425 670 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 ATP5LP4-201ENST00000434169 307 ntBASIC1.9□□□□□ -2.11
RPS28P62857 RPS29P6-201ENST00000438196 145 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AL513043.1-201ENST00000439124 535 ntBASIC1.9□□□□□ -2.11
RPS28P62857 RPS10P14-201ENST00000440748 502 ntBASIC1.9□□□□□ -2.11
RPS28P62857 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC1.9□□□□□ -2.11
RPS28P62857 MRPL35P4-201ENST00000453682 566 ntBASIC1.9□□□□□ -2.11
RPS28P62857 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 BX248409.1-201ENST00000455497 255 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC1.9□□□□□ -2.11
RPS28P62857 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC1.9□□□□□ -2.11
RPS28P62857 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 OR4A12P-201ENST00000530847 918 ntBASIC1.9□□□□□ -2.11
RPS28P62857 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AC103855.4-201ENST00000533158 265 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms