Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC000123.2-201ENST00000623124 461 ntBASIC3.45□□□□□ -1.86
LMO4P61968 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.45□□□□□ -1.86
LMO4P61968 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.45□□□□□ -1.86
LMO4P61968 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMO4P61968 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMO4P61968 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMO4P61968 NOL8P1-201ENST00000508336 3529 ntBASIC3.45□□□□□ -1.86
LMO4P61968 Z73965.1-201ENST00000623412 2297 ntBASIC3.45□□□□□ -1.86
LMO4P61968 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMO4P61968 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 AC116667.1-201ENST00000604855 2072 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC074029.4-201ENST00000624796 1859 ntBASIC3.44□□□□□ -1.86
LMO4P61968 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 AP000776.1-201ENST00000530032 1663 ntBASIC3.44□□□□□ -1.86
LMO4P61968 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LMO4P61968 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 Y_RNA.560-201ENST00000384689 102 ntBASIC3.44□□□□□ -1.86
LMO4P61968 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.44□□□□□ -1.86
LMO4P61968 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 OR8F1P-201ENST00000425243 930 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 RPL21P110-201ENST00000433345 446 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC002542.1-201ENST00000440683 193 ntBASIC3.44□□□□□ -1.86
LMO4P61968 MTND3P1-201ENST00000441336 220 ntBASIC3.44□□□□□ -1.86
LMO4P61968 RPL23AP76-201ENST00000441860 458 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AL591503.2-201ENST00000442314 1005 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC006011.1-201ENST00000442758 349 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.44□□□□□ -1.86
LMO4P61968 AP000936.2-201ENST00000447151 681 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 BX248409.1-201ENST00000455497 255 ntBASIC3.44□□□□□ -1.86
LMO4P61968 RPL30P6-201ENST00000475925 342 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 RN7SKP96-201ENST00000516948 297 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.44□□□□□ -1.86
LMO4P61968 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LMO4P61968 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 SERPINE4P-201ENST00000554978 281 ntBASIC3.44□□□□□ -1.86
LMO4P61968 ISCA1P3-201ENST00000577104 373 ntBASIC3.44□□□□□ -1.86
LMO4P61968 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 MIR4999-201ENST00000585029 91 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 AF131215.7-201ENST00000602443 707 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AP003465.2-201ENST00000602571 373 ntBASIC3.44□□□□□ -1.86
LMO4P61968 BNIP3P4-201ENST00000604946 565 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 AL138721.1-201ENST00000616756 179 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC099842.1-201ENST00000619919 596 ntBASIC3.44□□□□□ -1.86
LMO4P61968 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 AL359740.1-201ENST00000624340 592 ntBASIC3.44□□□□□ -1.86
LMO4P61968 MIR4278-201ENST00000636094 69 ntBASIC3.44□□□□□ -1.86
LMO4P61968 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.44□□□□□ -1.86
LMO4P61968 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
LMO4P61968 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMO4P61968 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMO4P61968 AC138393.1-206ENST00000540997 1886 ntBASIC3.43□□□□□ -1.86
LMO4P61968 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
LMO4P61968 PCAT14-202ENST00000627127 3935 ntBASIC3.43□□□□□ -1.86
LMO4P61968 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LMO4P61968 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
LMO4P61968 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.43□□□□□ -1.86
LMO4P61968 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.43□□□□□ -1.86
LMO4P61968 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMO4P61968 AL512646.1-201ENST00000269395 1077 ntBASIC3.43□□□□□ -1.86
LMO4P61968 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.43□□□□□ -1.86
LMO4P61968 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
LMO4P61968 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMO4P61968 RNU6-517P-201ENST00000384362 110 ntBASIC3.43□□□□□ -1.86
LMO4P61968 Y_RNA.553-201ENST00000384670 102 ntBASIC3.43□□□□□ -1.86
LMO4P61968 SNORA48.7-201ENST00000391302 135 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms