Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CR383658.2-201ENST00000547576 1525 ntBASIC2.92□□□□□ -1.94
VBP1P61758 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
VBP1P61758 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.92□□□□□ -1.94
VBP1P61758 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VBP1P61758 AL645937.1-201ENST00000641739 1652 ntBASIC2.92□□□□□ -1.94
VBP1P61758 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VBP1P61758 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VBP1P61758 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VBP1P61758 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
VBP1P61758 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VBP1P61758 RNU6-799P-201ENST00000363567 107 ntBASIC2.91□□□□□ -1.94
VBP1P61758 OR6C69P-201ENST00000394268 893 ntBASIC2.91□□□□□ -1.94
VBP1P61758 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.91□□□□□ -1.94
VBP1P61758 AL392003.1-201ENST00000434394 243 ntBASIC2.91□□□□□ -1.94
VBP1P61758 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.91□□□□□ -1.94
VBP1P61758 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.91□□□□□ -1.94
VBP1P61758 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.91□□□□□ -1.94
VBP1P61758 AC023512.1-201ENST00000444513 499 ntBASIC2.91□□□□□ -1.94
VBP1P61758 AC069540.1-201ENST00000446320 988 ntBASIC2.91□□□□□ -1.94
VBP1P61758 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.91□□□□□ -1.94
VBP1P61758 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.91□□□□□ -1.94
VBP1P61758 CYCSP35-201ENST00000451978 304 ntBASIC2.91□□□□□ -1.94
VBP1P61758 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VBP1P61758 HMGB1P3-201ENST00000502802 616 ntBASIC2.91□□□□□ -1.94
VBP1P61758 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.91□□□□□ -1.94
VBP1P61758 AC008565.1-201ENST00000509046 885 ntBASIC2.91□□□□□ -1.94
VBP1P61758 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.91□□□□□ -1.94
VBP1P61758 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.91□□□□□ -1.94
VBP1P61758 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.91□□□□□ -1.94
VBP1P61758 SNORA31.9-201ENST00000516429 84 ntBASIC2.91□□□□□ -1.94
VBP1P61758 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.91□□□□□ -1.94
VBP1P61758 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.91□□□□□ -1.94
VBP1P61758 AC090695.1-201ENST00000561269 1222 ntBASIC2.91□□□□□ -1.94
VBP1P61758 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.91□□□□□ -1.94
VBP1P61758 MIR4277-201ENST00000578298 84 ntBASIC2.91□□□□□ -1.94
VBP1P61758 AL359535.1-201ENST00000612100 1087 ntBASIC2.91□□□□□ -1.94
VBP1P61758 U6.48-201ENST00000618523 106 ntBASIC2.91□□□□□ -1.94
VBP1P61758 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.91□□□□□ -1.94
VBP1P61758 RNA5SP196-201ENST00000625967 102 ntBASIC2.91□□□□□ -1.94
VBP1P61758 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.91□□□□□ -1.94
VBP1P61758 OR52H1-202ENST00000641796 1061 ntBASIC2.91□□□□□ -1.94
VBP1P61758 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VBP1P61758 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
VBP1P61758 AC091564.4-201ENST00000533934 2194 ntBASIC2.91□□□□□ -1.94
VBP1P61758 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.9□□□□□ -1.94
VBP1P61758 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VBP1P61758 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 RPL23AP57-201ENST00000332361 466 ntBASIC2.9□□□□□ -1.95
VBP1P61758 SNORD9-201ENST00000362566 104 ntBASIC2.9□□□□□ -1.95
VBP1P61758 RNU1-70P-201ENST00000362618 164 ntBASIC2.9□□□□□ -1.95
VBP1P61758 BX682237.1-201ENST00000415016 335 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.9□□□□□ -1.95
VBP1P61758 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 RPL21P110-201ENST00000433345 446 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.9□□□□□ -1.95
VBP1P61758 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.9□□□□□ -1.95
VBP1P61758 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.9□□□□□ -1.95
VBP1P61758 NDUFA12P1-201ENST00000455914 406 ntBASIC2.9□□□□□ -1.95
VBP1P61758 RPL35AP28-201ENST00000459730 331 ntBASIC2.9□□□□□ -1.95
VBP1P61758 RN7SL601P-201ENST00000471221 293 ntBASIC2.9□□□□□ -1.95
VBP1P61758 GAPDHP36-201ENST00000480688 918 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
VBP1P61758 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.9□□□□□ -1.95
VBP1P61758 TRMT10BP1-201ENST00000519377 943 ntBASIC2.9□□□□□ -1.95
VBP1P61758 MRPL49P2-201ENST00000521066 465 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.9□□□□□ -1.95
VBP1P61758 CIR1P1-201ENST00000524055 1133 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.9□□□□□ -1.95
VBP1P61758 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 AC005476.1-201ENST00000554427 397 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 ZNF92P3-201ENST00000596594 954 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AC012119.1-201ENST00000603184 222 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AC009220.3-201ENST00000604318 586 ntBASIC2.9□□□□□ -1.95
VBP1P61758 AC019159.1-201ENST00000605094 187 ntBASIC2.9□□□□□ -1.95
VBP1P61758 HSPE1P14-201ENST00000605812 302 ntBASIC2.9□□□□□ -1.95
VBP1P61758 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.9□□□□□ -1.95
VBP1P61758 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
VBP1P61758 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.9□□□□□ -1.95
VBP1P61758 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
VBP1P61758 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
VBP1P61758 AC138915.1-201ENST00000565427 1685 ntBASIC2.89□□□□□ -1.95
VBP1P61758 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VBP1P61758 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VBP1P61758 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VBP1P61758 AL357075.1-201ENST00000404107 726 ntBASIC2.89□□□□□ -1.95
VBP1P61758 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.89□□□□□ -1.95
VBP1P61758 RBMY2KP-201ENST00000418221 992 ntBASIC2.89□□□□□ -1.95
VBP1P61758 MTCO3P4-201ENST00000419236 787 ntBASIC2.89□□□□□ -1.95
VBP1P61758 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.89□□□□□ -1.95
VBP1P61758 AC005189.1-201ENST00000431286 310 ntBASIC2.89□□□□□ -1.95
VBP1P61758 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.89□□□□□ -1.95
VBP1P61758 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.89□□□□□ -1.95
VBP1P61758 CDC27P1-201ENST00000445384 715 ntBASIC2.89□□□□□ -1.95
VBP1P61758 TPTE2P6-202ENST00000445572 1007 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms