Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FRG1HP-204ENST00000617940 757 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AC073569.3-201ENST00000619055 682 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AC015967.1-201ENST00000619893 476 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH4P55283 SEPT7P7-201ENST00000420492 1301 ntBASIC3.59□□□□□ -1.83
CDH4P55283 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH4P55283 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
CDH4P55283 AC068647.1-201ENST00000489539 2265 ntBASIC3.59□□□□□ -1.84
CDH4P55283 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDH4P55283 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDH4P55283 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CDH4P55283 AC000367.1-201ENST00000452711 1766 ntBASIC3.58□□□□□ -1.84
CDH4P55283 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH4P55283 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH4P55283 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH4P55283 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH4P55283 RNU6-1243P-201ENST00000364028 107 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH4P55283 SNORA11C-201ENST00000408532 129 ntBASIC3.58□□□□□ -1.84
CDH4P55283 RN7SKP111-201ENST00000410349 271 ntBASIC3.58□□□□□ -1.84
CDH4P55283 RNU6-272P-201ENST00000411028 104 ntBASIC3.58□□□□□ -1.84
CDH4P55283 RPS7P15-201ENST00000415804 584 ntBASIC3.58□□□□□ -1.84
CDH4P55283 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH4P55283 AC073310.1-201ENST00000423226 1033 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AC093422.3-201ENST00000428506 305 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH4P55283 YME1L1P1-201ENST00000429435 297 ntBASIC3.58□□□□□ -1.84
CDH4P55283 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.58□□□□□ -1.84
CDH4P55283 AC009263.1-201ENST00000441193 1239 ntBASIC3.58□□□□□ -1.84
CDH4P55283 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.58□□□□□ -1.84
CDH4P55283 NPM1P49-201ENST00000448027 714 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AC025518.1-201ENST00000479856 347 ntBASIC3.58□□□□□ -1.84
CDH4P55283 OR52A4P-202ENST00000481634 799 ntBASIC3.58□□□□□ -1.84
CDH4P55283 RPS3AP50-201ENST00000487064 803 ntBASIC3.58□□□□□ -1.84
CDH4P55283 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH4P55283 AC005921.1-201ENST00000510589 286 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AC023141.12-201ENST00000512399 199 ntBASIC3.58□□□□□ -1.84
CDH4P55283 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH4P55283 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH4P55283 AF279873.1-201ENST00000523393 313 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AP000619.3-201ENST00000535634 1127 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH4P55283 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH4P55283 EIF5A2P1-201ENST00000564027 460 ntBASIC3.58□□□□□ -1.84
CDH4P55283 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
CDH4P55283 KATNBL1P5-201ENST00000605015 517 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AC018754.1-201ENST00000607486 925 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AL163051.2-201ENST00000618976 735 ntBASIC3.58□□□□□ -1.84
CDH4P55283 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH4P55283 AL109659.3-201ENST00000624985 950 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AC073073.2-201ENST00000609827 2578 ntBASIC3.58□□□□□ -1.84
CDH4P55283 GABPAP-201ENST00000419271 1356 ntBASIC3.58□□□□□ -1.84
CDH4P55283 MTND4P21-201ENST00000453886 1357 ntBASIC3.58□□□□□ -1.84
CDH4P55283 AL157700.1-201ENST00000561973 1432 ntBASIC3.58□□□□□ -1.84
CDH4P55283 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CDH4P55283 AF127577.6-201ENST00000623352 2191 ntBASIC3.58□□□□□ -1.84
CDH4P55283 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH4P55283 RNU4-35P-201ENST00000362588 141 ntBASIC3.57□□□□□ -1.84
CDH4P55283 RNA5SP50-201ENST00000363731 107 ntBASIC3.57□□□□□ -1.84
CDH4P55283 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH4P55283 MIR183-201ENST00000384958 110 ntBASIC3.57□□□□□ -1.84
CDH4P55283 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
CDH4P55283 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDH4P55283 AC073264.1-201ENST00000411508 416 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH4P55283 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 AC093578.1-201ENST00000415219 368 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AC068533.1-201ENST00000418542 415 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AC005517.2-201ENST00000424673 553 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH4P55283 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 MTND5P28-201ENST00000438005 1594 ntBASIC3.57□□□□□ -1.84
CDH4P55283 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
CDH4P55283 CYCSP35-201ENST00000451978 304 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 SNRPGP3-201ENST00000469405 227 ntBASIC3.57□□□□□ -1.84
CDH4P55283 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 AC015724.1-201ENST00000478577 156 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 RNU6-202P-201ENST00000515998 96 ntBASIC3.57□□□□□ -1.84
CDH4P55283 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH4P55283 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH4P55283 HIGD1AP10-201ENST00000527837 282 ntBASIC3.57□□□□□ -1.84
CDH4P55283 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH4P55283 PDCL2P2-201ENST00000533651 189 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH4P55283 MTCYBP28-201ENST00000566728 1132 ntBASIC3.57□□□□□ -1.84
CDH4P55283 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH4P55283 AL009028.1-201ENST00000604895 802 ntBASIC3.57□□□□□ -1.84
CDH4P55283 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH4P55283 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH4P55283 MIR8058-201ENST00000615737 89 ntBASIC3.57□□□□□ -1.84
CDH4P55283 RMST_10.1-201ENST00000616309 154 ntBASIC3.57□□□□□ -1.84
CDH4P55283 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH4P55283 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDH4P55283 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms