Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.92□□□□□ -1.78
PDX1P52945 AC106871.1-201ENST00000568324 3102 ntBASIC3.92□□□□□ -1.78
PDX1P52945 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
PDX1P52945 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PDX1P52945 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
PDX1P52945 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.91□□□□□ -1.78
PDX1P52945 MTND5P31-201ENST00000419366 1374 ntBASIC3.91□□□□□ -1.78
PDX1P52945 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 OR10J6P-201ENST00000289731 930 ntBASIC3.91□□□□□ -1.78
PDX1P52945 OR4A15-201ENST00000314706 1035 ntBASIC3.91□□□□□ -1.78
PDX1P52945 SUGT1P1-201ENST00000379514 476 ntBASIC3.91□□□□□ -1.78
PDX1P52945 Y_RNA.465-201ENST00000384293 102 ntBASIC3.91□□□□□ -1.78
PDX1P52945 RNU6-921P-201ENST00000384361 107 ntBASIC3.91□□□□□ -1.78
PDX1P52945 MIR513A2-201ENST00000385249 127 ntBASIC3.91□□□□□ -1.78
PDX1P52945 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 RNU2-42P-201ENST00000410697 113 ntBASIC3.91□□□□□ -1.78
PDX1P52945 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.91□□□□□ -1.78
PDX1P52945 AC069157.1-201ENST00000421749 137 ntBASIC3.91□□□□□ -1.78
PDX1P52945 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.91□□□□□ -1.78
PDX1P52945 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.91□□□□□ -1.78
PDX1P52945 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.91□□□□□ -1.78
PDX1P52945 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.91□□□□□ -1.78
PDX1P52945 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.91□□□□□ -1.78
PDX1P52945 HMGB3P13-201ENST00000511263 607 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.91□□□□□ -1.78
PDX1P52945 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.91□□□□□ -1.78
PDX1P52945 RN7SKP31-201ENST00000516354 278 ntBASIC3.91□□□□□ -1.78
PDX1P52945 MYL12AP1-201ENST00000518490 515 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.91□□□□□ -1.78
PDX1P52945 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.91□□□□□ -1.78
PDX1P52945 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 AC069240.1-201ENST00000548774 375 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AC093519.1-201ENST00000566109 298 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AC138915.2-201ENST00000569776 97 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AC022662.1-201ENST00000580252 331 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.91□□□□□ -1.78
PDX1P52945 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.91□□□□□ -1.78
PDX1P52945 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 AC008739.3-201ENST00000603262 127 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AC114878.2-201ENST00000604863 1251 ntBASIC3.91□□□□□ -1.78
PDX1P52945 MIR6868-201ENST00000611215 58 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AC009464.1-201ENST00000615731 469 ntBASIC3.91□□□□□ -1.78
PDX1P52945 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 AC022509.4-201ENST00000621404 572 ntBASIC3.91□□□□□ -1.78
PDX1P52945 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.91□□□□□ -1.78
PDX1P52945 AC073348.1-201ENST00000623002 331 ntBASIC3.91□□□□□ -1.78
PDX1P52945 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.91□□□□□ -1.78
PDX1P52945 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PDX1P52945 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.91□□□□□ -1.78
PDX1P52945 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PDX1P52945 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDX1P52945 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.9□□□□□ -1.78
PDX1P52945 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDX1P52945 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.9□□□□□ -1.78
PDX1P52945 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.9□□□□□ -1.78
PDX1P52945 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDX1P52945 AL161912.2-201ENST00000565707 3007 ntBASIC3.9□□□□□ -1.78
PDX1P52945 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDX1P52945 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDX1P52945 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.9□□□□□ -1.78
PDX1P52945 RNU6-1066P-201ENST00000363573 105 ntBASIC3.9□□□□□ -1.79
PDX1P52945 RNU6-560P-201ENST00000364007 108 ntBASIC3.9□□□□□ -1.79
PDX1P52945 SNORD46.1-201ENST00000364139 104 ntBASIC3.9□□□□□ -1.79
PDX1P52945 RNA5SP387-201ENST00000364226 106 ntBASIC3.9□□□□□ -1.79
PDX1P52945 RNU6-657P-201ENST00000383904 107 ntBASIC3.9□□□□□ -1.79
PDX1P52945 TMSB4XP8-201ENST00000402089 135 ntBASIC3.9□□□□□ -1.79
PDX1P52945 LAP3P1-201ENST00000403648 294 ntBASIC3.9□□□□□ -1.79
PDX1P52945 RAB9AP3-201ENST00000412737 573 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC004987.3-201ENST00000413879 771 ntBASIC3.9□□□□□ -1.79
PDX1P52945 TMSB4XP6-201ENST00000415187 135 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC093578.1-201ENST00000415219 368 ntBASIC3.9□□□□□ -1.79
PDX1P52945 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.9□□□□□ -1.79
PDX1P52945 NUP35P2-201ENST00000416748 943 ntBASIC3.9□□□□□ -1.79
PDX1P52945 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.9□□□□□ -1.79
PDX1P52945 TMSB4XP1-201ENST00000424567 135 ntBASIC3.9□□□□□ -1.79
PDX1P52945 OR5BE1P-201ENST00000425977 939 ntBASIC3.9□□□□□ -1.79
PDX1P52945 OR4F13P-201ENST00000428478 931 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 AC005345.1-201ENST00000431868 217 ntBASIC3.9□□□□□ -1.79
PDX1P52945 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.9□□□□□ -1.79
PDX1P52945 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.9□□□□□ -1.79
PDX1P52945 RAB9AP1-201ENST00000449393 573 ntBASIC3.9□□□□□ -1.79
PDX1P52945 IFNWP4-201ENST00000453148 294 ntBASIC3.9□□□□□ -1.79
PDX1P52945 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC068587.2-201ENST00000478386 781 ntBASIC3.9□□□□□ -1.79
PDX1P52945 OR5H4P-201ENST00000510851 923 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 FABP5P12-201ENST00000515543 389 ntBASIC3.9□□□□□ -1.79
PDX1P52945 RNU6-352P-201ENST00000516908 107 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms