Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.74□□□□□ -1.65
NEK3P51956 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.74□□□□□ -1.65
NEK3P51956 AC244517.1-201ENST00000606030 2086 ntBASIC4.74□□□□□ -1.65
NEK3P51956 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 OR4K15-201ENST00000305051 1216 ntBASIC4.74□□□□□ -1.65
NEK3P51956 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NEK3P51956 RNU6-500P-201ENST00000362349 107 ntBASIC4.74□□□□□ -1.65
NEK3P51956 Y_RNA.302-201ENST00000364997 102 ntBASIC4.74□□□□□ -1.65
NEK3P51956 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.74□□□□□ -1.65
NEK3P51956 SNORA70F-201ENST00000384142 135 ntBASIC4.74□□□□□ -1.65
NEK3P51956 RNA5SP332-201ENST00000391063 115 ntBASIC4.74□□□□□ -1.65
NEK3P51956 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.74□□□□□ -1.65
NEK3P51956 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 RN7SKP266-201ENST00000410232 287 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AC140479.3-201ENST00000418944 1126 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AC007742.1-201ENST00000425789 329 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 ELOCP26-201ENST00000436067 329 ntBASIC4.74□□□□□ -1.65
NEK3P51956 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.74□□□□□ -1.65
NEK3P51956 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.74□□□□□ -1.65
NEK3P51956 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.74□□□□□ -1.65
NEK3P51956 HMGB1P15-201ENST00000453854 435 ntBASIC4.74□□□□□ -1.65
NEK3P51956 RN7SL459P-201ENST00000481078 302 ntBASIC4.74□□□□□ -1.65
NEK3P51956 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.74□□□□□ -1.65
NEK3P51956 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.74□□□□□ -1.65
NEK3P51956 COX7A2P2-201ENST00000505291 250 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AC111000.3-201ENST00000508057 576 ntBASIC4.74□□□□□ -1.65
NEK3P51956 HSPE1P23-201ENST00000509838 286 ntBASIC4.74□□□□□ -1.65
NEK3P51956 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.74□□□□□ -1.65
NEK3P51956 MTCYBP43-201ENST00000513621 740 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AC093677.1-201ENST00000514414 678 ntBASIC4.74□□□□□ -1.65
NEK3P51956 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.74□□□□□ -1.65
NEK3P51956 MTCO1P47-201ENST00000523889 1271 ntBASIC4.74□□□□□ -1.65
NEK3P51956 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.74□□□□□ -1.65
NEK3P51956 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.74□□□□□ -1.65
NEK3P51956 OR6C7P-201ENST00000547875 934 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.74□□□□□ -1.65
NEK3P51956 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.74□□□□□ -1.65
NEK3P51956 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.74□□□□□ -1.65
NEK3P51956 AC008088.1-201ENST00000580993 280 ntBASIC4.74□□□□□ -1.65
NEK3P51956 SLC25A36P1-201ENST00000590111 465 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.74□□□□□ -1.65
NEK3P51956 AL390208.1-201ENST00000605885 644 ntBASIC4.74□□□□□ -1.65
NEK3P51956 SNX18P1Y-201ENST00000616231 511 ntBASIC4.74□□□□□ -1.65
NEK3P51956 LINC00901.1-201ENST00000617252 152 ntBASIC4.74□□□□□ -1.65
NEK3P51956 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.74□□□□□ -1.65
NEK3P51956 AC007671.2-201ENST00000637344 619 ntBASIC4.74□□□□□ -1.65
NEK3P51956 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NEK3P51956 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 AL136164.3-201ENST00000624429 3978 ntBASIC4.74□□□□□ -1.65
NEK3P51956 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEK3P51956 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEK3P51956 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEK3P51956 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 Y_RNA.169-201ENST00000363745 96 ntBASIC4.73□□□□□ -1.65
NEK3P51956 SNORA71.2-201ENST00000364941 134 ntBASIC4.73□□□□□ -1.65
NEK3P51956 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NEK3P51956 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NEK3P51956 RNA5SP397-201ENST00000391323 118 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AL590762.2-201ENST00000395798 571 ntBASIC4.73□□□□□ -1.65
NEK3P51956 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 VDAC1P9-201ENST00000412766 841 ntBASIC4.73□□□□□ -1.65
NEK3P51956 RPL21P108-201ENST00000413857 481 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.73□□□□□ -1.65
NEK3P51956 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.73□□□□□ -1.65
NEK3P51956 DNAJC19P7-201ENST00000428811 344 ntBASIC4.73□□□□□ -1.65
NEK3P51956 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.73□□□□□ -1.65
NEK3P51956 HMGB1P25-201ENST00000468402 607 ntBASIC4.73□□□□□ -1.65
NEK3P51956 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NEK3P51956 ST13P14-201ENST00000474095 734 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AC072039.1-201ENST00000477611 581 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 AC078817.1-201ENST00000492623 435 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AC025164.1-201ENST00000496249 478 ntBASIC4.73□□□□□ -1.65
NEK3P51956 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 AC006390.1-201ENST00000508068 283 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.73□□□□□ -1.65
NEK3P51956 RNA5SP446-201ENST00000515955 82 ntBASIC4.73□□□□□ -1.65
NEK3P51956 RN7SKP92-201ENST00000517266 244 ntBASIC4.73□□□□□ -1.65
NEK3P51956 RAB9BP1-201ENST00000519581 626 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.73□□□□□ -1.65
NEK3P51956 AC012182.1-201ENST00000570133 895 ntBASIC4.73□□□□□ -1.65
NEK3P51956 BBIP1P1-201ENST00000602999 279 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AC008745.1-201ENST00000604064 271 ntBASIC4.73□□□□□ -1.65
NEK3P51956 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.73□□□□□ -1.65
NEK3P51956 MIR7641-1-201ENST00000627518 61 ntBASIC4.73□□□□□ -1.65
NEK3P51956 PCMTD1P7-201ENST00000634506 357 ntBASIC4.73□□□□□ -1.65
NEK3P51956 AC127502.3-201ENST00000636170 1206 ntBASIC4.73□□□□□ -1.65
NEK3P51956 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NEK3P51956 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.73□□□□□ -1.65
NEK3P51956 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NEK3P51956 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.73□□□□□ -1.65
NEK3P51956 AC092435.4-201ENST00000623012 4159 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms