Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CDX1P47902 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.59□□□□□ -1.84
CDX1P47902 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CDX1P47902 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CDX1P47902 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDX1P47902 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDX1P47902 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDX1P47902 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 AL138880.1-201ENST00000405824 642 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC016397.1-201ENST00000412463 242 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AIMP1P1-201ENST00000418670 937 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC006960.1-201ENST00000419980 153 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 PSMA6P3-201ENST00000428242 164 ntBASIC3.58□□□□□ -1.84
CDX1P47902 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.58□□□□□ -1.84
CDX1P47902 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 BMS1P19-201ENST00000433925 393 ntBASIC3.58□□□□□ -1.84
CDX1P47902 RPL21P112-201ENST00000434403 463 ntBASIC3.58□□□□□ -1.84
CDX1P47902 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 MTND3P1-201ENST00000441336 220 ntBASIC3.58□□□□□ -1.84
CDX1P47902 Z73417.1-201ENST00000447373 778 ntBASIC3.58□□□□□ -1.84
CDX1P47902 NPM1P49-201ENST00000448027 714 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.58□□□□□ -1.84
CDX1P47902 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.58□□□□□ -1.84
CDX1P47902 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.58□□□□□ -1.84
CDX1P47902 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC078918.1-201ENST00000498515 228 ntBASIC3.58□□□□□ -1.84
CDX1P47902 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 AC006390.1-201ENST00000508068 283 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 AC005921.1-201ENST00000510589 286 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC010625.1-201ENST00000511296 403 ntBASIC3.58□□□□□ -1.84
CDX1P47902 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.58□□□□□ -1.84
CDX1P47902 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 FTH1P9-201ENST00000513251 355 ntBASIC3.58□□□□□ -1.84
CDX1P47902 RNU6-27P-201ENST00000516146 107 ntBASIC3.58□□□□□ -1.84
CDX1P47902 RNU2-58P-201ENST00000516403 183 ntBASIC3.58□□□□□ -1.84
CDX1P47902 RN7SKP265-201ENST00000516448 223 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 AP004371.1-201ENST00000525240 214 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AP000827.1-201ENST00000527814 258 ntBASIC3.58□□□□□ -1.84
CDX1P47902 MTCO2P15-201ENST00000532655 656 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AP004242.1-201ENST00000533701 349 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.58□□□□□ -1.84
CDX1P47902 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.58□□□□□ -1.84
CDX1P47902 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDX1P47902 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.58□□□□□ -1.84
CDX1P47902 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.58□□□□□ -1.84
CDX1P47902 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.58□□□□□ -1.84
CDX1P47902 AC245036.5-201ENST00000596330 847 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC012603.1-201ENST00000606424 528 ntBASIC3.58□□□□□ -1.84
CDX1P47902 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.58□□□□□ -1.84
CDX1P47902 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDX1P47902 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 AC135352.1-201ENST00000506173 1418 ntBASIC3.58□□□□□ -1.84
CDX1P47902 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.58□□□□□ -1.84
CDX1P47902 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDX1P47902 ZNF962P-201ENST00000443465 3140 ntBASIC3.57□□□□□ -1.84
CDX1P47902 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDX1P47902 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDX1P47902 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.57□□□□□ -1.84
CDX1P47902 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDX1P47902 RNA5SP388-201ENST00000362584 119 ntBASIC3.57□□□□□ -1.84
CDX1P47902 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDX1P47902 MIR141-201ENST00000384975 95 ntBASIC3.57□□□□□ -1.84
CDX1P47902 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDX1P47902 U3.29-201ENST00000391296 212 ntBASIC3.57□□□□□ -1.84
CDX1P47902 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.57□□□□□ -1.84
CDX1P47902 MIR1284-201ENST00000408337 120 ntBASIC3.57□□□□□ -1.84
CDX1P47902 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.57□□□□□ -1.84
CDX1P47902 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.57□□□□□ -1.84
CDX1P47902 AL049610.1-201ENST00000423374 372 ntBASIC3.57□□□□□ -1.84
CDX1P47902 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDX1P47902 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.57□□□□□ -1.84
CDX1P47902 TRGVB-201ENST00000453257 471 ntBASIC3.57□□□□□ -1.84
CDX1P47902 MTCO3P11-201ENST00000455103 774 ntBASIC3.57□□□□□ -1.84
CDX1P47902 MTND2P28-201ENST00000457540 1044 ntBASIC3.57□□□□□ -1.84
CDX1P47902 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.57□□□□□ -1.84
CDX1P47902 RPL7P18-201ENST00000478965 734 ntBASIC3.57□□□□□ -1.84
CDX1P47902 FAM172BP-201ENST00000487497 1089 ntBASIC3.57□□□□□ -1.84
CDX1P47902 AC068305.1-201ENST00000497406 726 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms