Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD13P35453 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD13P35453 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD13P35453 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 ZNF37BP-203ENST00000452306 1352 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 RNA5SP283-201ENST00000365604 119 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 SNORA51.6-201ENST00000384151 125 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 RNU6-837P-201ENST00000391056 108 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 MIR1251-201ENST00000408552 70 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 RNU2-42P-201ENST00000410697 113 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD13P35453 JKAMPP1-201ENST00000413804 919 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD13P35453 MTND2P9-201ENST00000422293 931 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 NANOGP6-201ENST00000429190 847 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 MTCO2P25-201ENST00000447065 681 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD13P35453 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 AC103987.1-201ENST00000473394 348 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 RPL5P23-201ENST00000496040 868 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 AC010460.2-201ENST00000509054 677 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD13P35453 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD13P35453 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD13P35453 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD13P35453 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD13P35453 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD13P35453 TRAV15-201ENST00000556680 249 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD13P35453 BNIP3P26-201ENST00000600827 554 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AC105148.1-201ENST00000604961 409 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AC128687.2-201ENST00000609657 566 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AC023158.2-201ENST00000614876 543 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AC073968.1-201ENST00000618594 637 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AL158163.2-201ENST00000619110 700 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AC068787.1-201ENST00000623908 691 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD13P35453 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD13P35453 UBE3AP2-201ENST00000429033 2259 ntBASIC4.32□□□□□ -1.72
HOXD13P35453 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD13P35453 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD13P35453 CDR1-202ENST00000625883 1485 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD13P35453 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HOXD13P35453 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
HOXD13P35453 OR11H5P-202ENST00000641612 1325 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 SPRR2C-201ENST00000290702 219 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 RNU5D-1-201ENST00000363299 116 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 RNA5SP515-201ENST00000364570 118 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD13P35453 AL513175.2-201ENST00000422071 443 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD13P35453 AL035410.1-201ENST00000427409 427 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD13P35453 NANOGP2-201ENST00000435391 727 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 Z74696.2-201ENST00000436514 498 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD13P35453 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD13P35453 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD13P35453 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD13P35453 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD13P35453 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD13P35453 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD13P35453 AC005410.1-202ENST00000460347 485 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AC011979.1-201ENST00000472300 483 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AL136126.1-201ENST00000473603 402 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 SYPL1P1-201ENST00000473622 768 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AC093767.1-201ENST00000504523 156 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD13P35453 RNU6-352P-201ENST00000516908 107 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD13P35453 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD13P35453 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD13P35453 AL389895.1-201ENST00000554127 252 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AADACP1-206ENST00000561502 1193 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AL049838.1-201ENST00000563647 981 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD13P35453 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 AC009318.4-201ENST00000620496 486 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 AC092184.1-201ENST00000625042 715 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD13P35453 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD13P35453 AC090897.3-201ENST00000636973 1157 ntBASIC4.31□□□□□ -1.72
HOXD13P35453 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD13P35453 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD13P35453 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms