Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CKS2P33552 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CKS2P33552 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CKS2P33552 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CKS2P33552 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CKS2P33552 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.22□□□□□ -2.05
CKS2P33552 AC116096.1-201ENST00000566804 2314 ntBASIC2.22□□□□□ -2.05
CKS2P33552 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CKS2P33552 RNU1-101P-201ENST00000391171 127 ntBASIC2.22□□□□□ -2.05
CKS2P33552 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.22□□□□□ -2.05
CKS2P33552 DNAJC19P6-201ENST00000401853 280 ntBASIC2.22□□□□□ -2.05
CKS2P33552 PPIAP31-201ENST00000405422 495 ntBASIC2.22□□□□□ -2.05
CKS2P33552 RNU2-71P-201ENST00000411395 189 ntBASIC2.22□□□□□ -2.05
CKS2P33552 OR1AA1P-201ENST00000419597 916 ntBASIC2.22□□□□□ -2.05
CKS2P33552 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.22□□□□□ -2.05
CKS2P33552 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.22□□□□□ -2.05
CKS2P33552 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.22□□□□□ -2.05
CKS2P33552 CEACAMP9-201ENST00000442990 513 ntBASIC2.22□□□□□ -2.05
CKS2P33552 RPL39P40-201ENST00000445481 146 ntBASIC2.22□□□□□ -2.05
CKS2P33552 GSTA11P-201ENST00000452866 669 ntBASIC2.22□□□□□ -2.05
CKS2P33552 AL590639.1-201ENST00000456484 337 ntBASIC2.22□□□□□ -2.05
CKS2P33552 AC114982.2-201ENST00000461396 358 ntBASIC2.22□□□□□ -2.05
CKS2P33552 AC008571.1-201ENST00000467232 300 ntBASIC2.22□□□□□ -2.05
CKS2P33552 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.22□□□□□ -2.05
CKS2P33552 ARL4AP2-201ENST00000507378 601 ntBASIC2.22□□□□□ -2.05
CKS2P33552 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.22□□□□□ -2.05
CKS2P33552 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CKS2P33552 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.22□□□□□ -2.05
CKS2P33552 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 AL157394.1-201ENST00000562983 1224 ntBASIC2.22□□□□□ -2.05
CKS2P33552 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.22□□□□□ -2.05
CKS2P33552 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.22□□□□□ -2.05
CKS2P33552 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.22□□□□□ -2.05
CKS2P33552 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
CKS2P33552 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.22□□□□□ -2.05
CKS2P33552 AC005972.3-201ENST00000606304 481 ntBASIC2.22□□□□□ -2.05
CKS2P33552 MIR6733-201ENST00000635723 61 ntBASIC2.22□□□□□ -2.05
CKS2P33552 AL359715.4-201ENST00000606629 1436 ntBASIC2.22□□□□□ -2.05
CKS2P33552 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CKS2P33552 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.22□□□□□ -2.05
CKS2P33552 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CKS2P33552 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CKS2P33552 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.21□□□□□ -2.05
CKS2P33552 Z83843.1-201ENST00000604070 3685 ntBASIC2.21□□□□□ -2.06
CKS2P33552 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CKS2P33552 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS2P33552 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CKS2P33552 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CKS2P33552 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 RPL21P17-201ENST00000397467 475 ntBASIC2.21□□□□□ -2.06
CKS2P33552 HNRNPDP2-201ENST00000406475 478 ntBASIC2.21□□□□□ -2.06
CKS2P33552 HMGN1P24-201ENST00000412282 298 ntBASIC2.21□□□□□ -2.06
CKS2P33552 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS2P33552 AC007064.3-201ENST00000422608 359 ntBASIC2.21□□□□□ -2.06
CKS2P33552 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS2P33552 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS2P33552 RPL21P2-201ENST00000440049 481 ntBASIC2.21□□□□□ -2.06
CKS2P33552 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS2P33552 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS2P33552 RPS17P11-201ENST00000474297 293 ntBASIC2.21□□□□□ -2.06
CKS2P33552 RN7SL499P-201ENST00000481141 276 ntBASIC2.21□□□□□ -2.06
CKS2P33552 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
CKS2P33552 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS2P33552 GMPSP1-201ENST00000514075 579 ntBASIC2.21□□□□□ -2.06
CKS2P33552 RN7SKP13-201ENST00000515933 244 ntBASIC2.21□□□□□ -2.06
CKS2P33552 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 C1GALT1P3-201ENST00000522049 819 ntBASIC2.21□□□□□ -2.06
CKS2P33552 OR5G4P-201ENST00000525251 760 ntBASIC2.21□□□□□ -2.06
CKS2P33552 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS2P33552 RN7SL703P-201ENST00000578485 302 ntBASIC2.21□□□□□ -2.06
CKS2P33552 MIR2682-201ENST00000580305 110 ntBASIC2.21□□□□□ -2.06
CKS2P33552 RN7SL339P-201ENST00000580597 296 ntBASIC2.21□□□□□ -2.06
CKS2P33552 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.21□□□□□ -2.06
CKS2P33552 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS2P33552 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 MIR6864-201ENST00000617935 70 ntBASIC2.21□□□□□ -2.06
CKS2P33552 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 MIR7641-1-201ENST00000627518 61 ntBASIC2.21□□□□□ -2.06
CKS2P33552 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CKS2P33552 MTCO1P8-201ENST00000416914 1523 ntBASIC2.21□□□□□ -2.06
CKS2P33552 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS2P33552 AC011978.2-201ENST00000569835 2054 ntBASIC2.21□□□□□ -2.06
CKS2P33552 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CKS2P33552 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CKS2P33552 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKS2P33552 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKS2P33552 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKS2P33552 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CKS2P33552 SNORD15B-201ENST00000384714 146 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms