Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 AC011939.3-201ENST00000613686 466 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AL354976.1-201ENST00000613843 387 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CIITAP33076 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CIITAP33076 XPOTP1-201ENST00000443317 2398 ntBASIC4.61□□□□□ -1.67
CIITAP33076 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 AL391994.1-201ENST00000254724 282 ntBASIC4.6□□□□□ -1.67
CIITAP33076 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CIITAP33076 RNU6-553P-201ENST00000364047 96 ntBASIC4.6□□□□□ -1.67
CIITAP33076 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CIITAP33076 AL121834.1-202ENST00000404494 277 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AL161449.1-201ENST00000414531 1199 ntBASIC4.6□□□□□ -1.67
CIITAP33076 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 AC098592.1-201ENST00000419352 333 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AL139421.1-201ENST00000423010 169 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC234781.2-201ENST00000426370 994 ntBASIC4.6□□□□□ -1.67
CIITAP33076 Z93242.1-201ENST00000427102 353 ntBASIC4.6□□□□□ -1.67
CIITAP33076 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.6□□□□□ -1.67
CIITAP33076 VDAC1P6-201ENST00000430062 855 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AL117339.2-201ENST00000430475 180 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.6□□□□□ -1.67
CIITAP33076 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.6□□□□□ -1.67
CIITAP33076 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.6□□□□□ -1.67
CIITAP33076 UBE2V1P5-201ENST00000440070 405 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC093155.1-201ENST00000440164 826 ntBASIC4.6□□□□□ -1.67
CIITAP33076 RPS4XP4-201ENST00000443195 763 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 AC097262.1-201ENST00000452559 548 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 RPL5P24-201ENST00000463742 885 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.6□□□□□ -1.67
CIITAP33076 RN7SL271P-201ENST00000487601 295 ntBASIC4.6□□□□□ -1.67
CIITAP33076 RPS27P23-201ENST00000487608 251 ntBASIC4.6□□□□□ -1.67
CIITAP33076 RPL29P14-201ENST00000495837 428 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 WBP1LP4-201ENST00000505043 344 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 AC017037.1-201ENST00000508460 471 ntBASIC4.6□□□□□ -1.67
CIITAP33076 MTCYBP16-201ENST00000509187 1129 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC079395.1-201ENST00000510981 262 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC008494.2-201ENST00000514544 370 ntBASIC4.6□□□□□ -1.67
CIITAP33076 RN7SKP96-201ENST00000516948 297 ntBASIC4.6□□□□□ -1.67
CIITAP33076 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.6□□□□□ -1.67
CIITAP33076 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CIITAP33076 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.6□□□□□ -1.67
CIITAP33076 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 AC022069.1-201ENST00000582910 658 ntBASIC4.6□□□□□ -1.67
CIITAP33076 NBR2-204ENST00000587322 63 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 OR2AS2P-201ENST00000606902 342 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 MIR6868-201ENST00000611215 58 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC122108.2-201ENST00000611946 526 ntBASIC4.6□□□□□ -1.67
CIITAP33076 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC090246.1-201ENST00000616499 426 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC009237.17-201ENST00000618111 748 ntBASIC4.6□□□□□ -1.67
CIITAP33076 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.6□□□□□ -1.67
CIITAP33076 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.6□□□□□ -1.67
CIITAP33076 AC109315.1-201ENST00000584143 1347 ntBASIC4.6□□□□□ -1.67
CIITAP33076 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CIITAP33076 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CIITAP33076 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CIITAP33076 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CIITAP33076 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CIITAP33076 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CIITAP33076 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CIITAP33076 AL590084.2-201ENST00000401481 382 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.59□□□□□ -1.67
CIITAP33076 RPL21P65-201ENST00000406094 466 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 AC004022.2-201ENST00000413824 193 ntBASIC4.59□□□□□ -1.67
CIITAP33076 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 USP9YP31-201ENST00000431405 881 ntBASIC4.59□□□□□ -1.67
CIITAP33076 MARK2P15-201ENST00000432204 2186 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 RPL21P110-201ENST00000433345 446 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC105402.2-201ENST00000438503 358 ntBASIC4.59□□□□□ -1.67
CIITAP33076 USP9YP22-201ENST00000438971 294 ntBASIC4.59□□□□□ -1.67
CIITAP33076 RPL21P89-201ENST00000444021 467 ntBASIC4.59□□□□□ -1.67
CIITAP33076 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 ELL2P3-201ENST00000457883 1602 ntBASIC4.59□□□□□ -1.67
CIITAP33076 BZW1P2-201ENST00000473537 826 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC015724.1-201ENST00000478577 156 ntBASIC4.59□□□□□ -1.67
CIITAP33076 LINC00888-204ENST00000487386 421 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms