Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 RPL9P32-201ENST00000464118 620 ntBASIC4.28□□□□□ -1.72
PTPRMP28827 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPRMP28827 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPRMP28827 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPRMP28827 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPRMP28827 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPRMP28827 RMST_9.1-201ENST00000619945 193 ntBASIC4.28□□□□□ -1.72
PTPRMP28827 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPRMP28827 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRMP28827 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPRMP28827 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRMP28827 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPRMP28827 AC108206.1-201ENST00000570186 4159 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPRMP28827 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRMP28827 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRMP28827 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRMP28827 RN7SKP223-201ENST00000410582 62 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPRMP28827 MTCO1P39-201ENST00000426148 480 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 NIPA2P5-201ENST00000452282 464 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 SEPT7P6-201ENST00000469999 1143 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 AC008565.1-201ENST00000509046 885 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRMP28827 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPRMP28827 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRMP28827 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPRMP28827 TGIF1P1-201ENST00000558095 802 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 MIR4648-201ENST00000580107 72 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 AC025811.1-201ENST00000604312 472 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PTPRMP28827 HSPA8P1-201ENST00000425843 1833 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPRMP28827 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPRMP28827 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPRMP28827 AC091564.4-201ENST00000533934 2194 ntBASIC4.27□□□□□ -1.73
PTPRMP28827 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRMP28827 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRMP28827 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PTPRMP28827 ATF1P1-201ENST00000406040 927 ntBASIC4.26□□□□□ -1.73
PTPRMP28827 RNA5SP296-201ENST00000410523 111 ntBASIC4.26□□□□□ -1.73
PTPRMP28827 CKS1BP2-201ENST00000497342 240 ntBASIC4.26□□□□□ -1.73
PTPRMP28827 KLHL2P1-201ENST00000508691 521 ntBASIC4.26□□□□□ -1.73
PTPRMP28827 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPRMP28827 AC044913.1-201ENST00000557200 430 ntBASIC4.26□□□□□ -1.73
PTPRMP28827 MAPK10-362ENST00000641864 4484 ntBASIC4.26□□□□□ -1.73
PTPRMP28827 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PTPRMP28827 AC005332.5-201ENST00000591222 2919 ntBASIC4.26□□□□□ -1.73
PTPRMP28827 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PTPRMP28827 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPRMP28827 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PTPRMP28827 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRMP28827 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 SYT14P1-202ENST00000600441 1448 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 Y_RNA.118-201ENST00000363300 101 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 RNU1-112P-201ENST00000364401 164 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 AL139039.1-201ENST00000401900 692 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 Z98742.3-201ENST00000418637 326 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 AL590103.1-201ENST00000434488 307 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 AP001636.2-201ENST00000525517 696 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPRMP28827 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PTPRMP28827 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPRMP28827 DNAJC19P3-201ENST00000594491 331 ntBASIC4.25□□□□□ -1.73
PTPRMP28827 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRMP28827 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPRMP28827 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRMP28827 RNA5SP289-201ENST00000362332 137 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPRMP28827 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPRMP28827 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPRMP28827 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPRMP28827 RNA5SP445-201ENST00000515889 115 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 SERPINE4P-201ENST00000554978 281 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC141257.3-201ENST00000572906 215 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPRMP28827 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPRMP28827 AC016590.3-201ENST00000611171 753 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRMP28827 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRMP28827 MAPK10-373ENST00000641983 6772 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRMP28827 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PTPRMP28827 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRMP28827 VTA1P1-201ENST00000414044 866 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 DUTP6-201ENST00000425573 462 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 ISCA1P2-201ENST00000438679 421 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPRMP28827 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPRMP28827 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPRMP28827 AC011602.1-201ENST00000546484 331 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPRMP28827 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPRMP28827 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.24□□□□□ -1.73
PTPRMP28827 AL158196.1-201ENST00000616786 434 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPRMP28827 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPRMP28827 AC091903.1-201ENST00000624322 454 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC073476.4-201ENST00000628409 72 ntBASIC4.24□□□□□ -1.73
PTPRMP28827 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms