Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL451074.3-201ENST00000437709 472 ntBASIC2.88□□□□□ -1.95
VCANP13611 AC011753.1-201ENST00000451001 220 ntBASIC2.88□□□□□ -1.95
VCANP13611 MTCO3P16-201ENST00000454456 754 ntBASIC2.88□□□□□ -1.95
VCANP13611 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
VCANP13611 AC073476.4-201ENST00000628409 72 ntBASIC2.88□□□□□ -1.95
VCANP13611 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
VCANP13611 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
VCANP13611 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
VCANP13611 AL049555.1-201ENST00000562834 1933 ntBASIC2.88□□□□□ -1.95
VCANP13611 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.88□□□□□ -1.95
VCANP13611 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
VCANP13611 AC092013.1-201ENST00000438795 332 ntBASIC2.87□□□□□ -1.95
VCANP13611 OR4G11P-201ENST00000492842 939 ntBASIC2.87□□□□□ -1.95
VCANP13611 SNORA70.19-201ENST00000516717 90 ntBASIC2.87□□□□□ -1.95
VCANP13611 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.87□□□□□ -1.95
VCANP13611 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.87□□□□□ -1.95
VCANP13611 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.87□□□□□ -1.95
VCANP13611 Z82209.1-201ENST00000422141 2135 ntBASIC2.87□□□□□ -1.95
VCANP13611 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VCANP13611 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VCANP13611 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.87□□□□□ -1.95
VCANP13611 BX005019.1-201ENST00000561881 1810 ntBASIC2.87□□□□□ -1.95
VCANP13611 AC022031.1-201ENST00000585985 2593 ntBASIC2.87□□□□□ -1.95
VCANP13611 MIR27B-201ENST00000385129 97 ntBASIC2.87□□□□□ -1.95
VCANP13611 DPH3P2-201ENST00000422618 250 ntBASIC2.87□□□□□ -1.95
VCANP13611 MTND2P11-201ENST00000423638 648 ntBASIC2.87□□□□□ -1.95
VCANP13611 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.87□□□□□ -1.95
VCANP13611 PPP1R11P1-201ENST00000486095 376 ntBASIC2.87□□□□□ -1.95
VCANP13611 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.87□□□□□ -1.95
VCANP13611 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.87□□□□□ -1.95
VCANP13611 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.87□□□□□ -1.95
VCANP13611 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VCANP13611 RNU6-582P-201ENST00000362989 107 ntBASIC2.87□□□□□ -1.95
VCANP13611 RN7SKP199-201ENST00000410325 305 ntBASIC2.87□□□□□ -1.95
VCANP13611 RNU6-321P-201ENST00000410912 106 ntBASIC2.87□□□□□ -1.95
VCANP13611 RPL7P8-201ENST00000411964 730 ntBASIC2.87□□□□□ -1.95
VCANP13611 RANP7-201ENST00000418085 644 ntBASIC2.87□□□□□ -1.95
VCANP13611 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.87□□□□□ -1.95
VCANP13611 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.87□□□□□ -1.95
VCANP13611 RN7SL93P-201ENST00000463035 293 ntBASIC2.87□□□□□ -1.95
VCANP13611 AC092045.1-201ENST00000495716 1231 ntBASIC2.87□□□□□ -1.95
VCANP13611 RNA5SP282-201ENST00000516355 108 ntBASIC2.87□□□□□ -1.95
VCANP13611 OR5AP1P-201ENST00000529730 940 ntBASIC2.87□□□□□ -1.95
VCANP13611 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
VCANP13611 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.87□□□□□ -1.95
VCANP13611 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCANP13611 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCANP13611 AC005005.4-201ENST00000623789 16698 ntBASIC2.86□□□□□ -1.95
VCANP13611 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.86□□□□□ -1.95
VCANP13611 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VCANP13611 SNORA70E-201ENST00000384492 135 ntBASIC2.86□□□□□ -1.95
VCANP13611 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.86□□□□□ -1.95
VCANP13611 AC090525.1-201ENST00000479116 478 ntBASIC2.86□□□□□ -1.95
VCANP13611 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.86□□□□□ -1.95
VCANP13611 TAB3P1-202ENST00000452645 1634 ntBASIC2.86□□□□□ -1.95
VCANP13611 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCANP13611 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.86□□□□□ -1.95
VCANP13611 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.86□□□□□ -1.95
VCANP13611 YWHAEP5-201ENST00000431545 765 ntBASIC2.86□□□□□ -1.95
VCANP13611 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.86□□□□□ -1.95
VCANP13611 AP001025.2-201ENST00000490908 477 ntBASIC2.86□□□□□ -1.95
VCANP13611 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.86□□□□□ -1.95
VCANP13611 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.86□□□□□ -1.95
VCANP13611 AC233702.9-201ENST00000581528 203 ntBASIC2.86□□□□□ -1.95
VCANP13611 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCANP13611 AC004696.1-201ENST00000614345 607 ntBASIC2.86□□□□□ -1.95
VCANP13611 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
VCANP13611 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VCANP13611 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VCANP13611 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.86□□□□□ -1.95
VCANP13611 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VCANP13611 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
VCANP13611 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCANP13611 AL049610.1-201ENST00000423374 372 ntBASIC2.86□□□□□ -1.95
VCANP13611 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCANP13611 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.86□□□□□ -1.95
VCANP13611 AC006484.1-201ENST00000435086 1884 ntBASIC2.85□□□□□ -1.95
VCANP13611 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCANP13611 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCANP13611 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCANP13611 CYCSP49-201ENST00000420810 319 ntBASIC2.85□□□□□ -1.95
VCANP13611 AC096638.1-201ENST00000444678 216 ntBASIC2.85□□□□□ -1.95
VCANP13611 MOB1AP2-201ENST00000446060 614 ntBASIC2.85□□□□□ -1.95
VCANP13611 HIGD1AP2-201ENST00000446367 280 ntBASIC2.85□□□□□ -1.95
VCANP13611 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.85□□□□□ -1.95
VCANP13611 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VCANP13611 AC092436.3-201ENST00000511788 257 ntBASIC2.85□□□□□ -1.95
VCANP13611 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.85□□□□□ -1.95
VCANP13611 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.85□□□□□ -1.95
VCANP13611 AL158062.1-201ENST00000619632 745 ntBASIC2.85□□□□□ -1.95
VCANP13611 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VCANP13611 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.85□□□□□ -1.95
VCANP13611 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.85□□□□□ -1.95
VCANP13611 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VCANP13611 AC107081.1-201ENST00000414975 361 ntBASIC2.85□□□□□ -1.95
VCANP13611 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VCANP13611 NANOGP6-201ENST00000429190 847 ntBASIC2.85□□□□□ -1.95
VCANP13611 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.85□□□□□ -1.95
VCANP13611 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.85□□□□□ -1.95
VCANP13611 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms