Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP000919.1-202ENST00000581139 1264 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.8□□□□□ -1.64
TOP2AP11388 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TOP2AP11388 ZNF826P-207ENST00000622273 1910 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.79□□□□□ -1.64
TOP2AP11388 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TOP2AP11388 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP2AP11388 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TOP2AP11388 RN7SKP285-201ENST00000410137 318 ntBASIC4.79□□□□□ -1.64
TOP2AP11388 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP2AP11388 AL121877.1-201ENST00000453704 622 ntBASIC4.79□□□□□ -1.64
TOP2AP11388 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP2AP11388 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.79□□□□□ -1.64
TOP2AP11388 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.79□□□□□ -1.64
TOP2AP11388 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.79□□□□□ -1.64
TOP2AP11388 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.79□□□□□ -1.64
TOP2AP11388 AC064859.1-201ENST00000624741 174 ntBASIC4.79□□□□□ -1.64
TOP2AP11388 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TOP2AP11388 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TOP2AP11388 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TOP2AP11388 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
TOP2AP11388 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TOP2AP11388 MIR26A1-201ENST00000362205 77 ntBASIC4.78□□□□□ -1.64
TOP2AP11388 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TOP2AP11388 MIR887-201ENST00000401258 79 ntBASIC4.78□□□□□ -1.64
TOP2AP11388 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.78□□□□□ -1.64
TOP2AP11388 AL589765.3-201ENST00000446084 462 ntBASIC4.78□□□□□ -1.64
TOP2AP11388 RPL23AP31-201ENST00000456160 467 ntBASIC4.78□□□□□ -1.64
TOP2AP11388 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.78□□□□□ -1.64
TOP2AP11388 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.78□□□□□ -1.64
TOP2AP11388 AC010338.1-201ENST00000621823 717 ntBASIC4.78□□□□□ -1.64
TOP2AP11388 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TOP2AP11388 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TOP2AP11388 RNA5SP289-201ENST00000362332 137 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP2AP11388 RPL7P10-201ENST00000417407 739 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP2AP11388 YWHAEP4-201ENST00000505390 198 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.77□□□□□ -1.65
TOP2AP11388 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.77□□□□□ -1.65
TOP2AP11388 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TOP2AP11388 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP2AP11388 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TOP2AP11388 ZNF658B-202ENST00000615961 3375 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 AC092593.1-201ENST00000515413 1815 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 MIR423-201ENST00000362201 94 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 NPM1P11-201ENST00000417106 855 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 RPL31P12-201ENST00000422587 358 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP2AP11388 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.77□□□□□ -1.65
TOP2AP11388 RPL7L1P13-201ENST00000511702 739 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 RN7SKP43-201ENST00000516173 320 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 FAM60DP-201ENST00000524174 632 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.77□□□□□ -1.65
TOP2AP11388 AC009039.2-201ENST00000624524 529 ntBASIC4.77□□□□□ -1.65
TOP2AP11388 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOP2AP11388 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TOP2AP11388 TRBV12-1-201ENST00000479785 344 ntBASIC4.76□□□□□ -1.65
TOP2AP11388 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.76□□□□□ -1.65
TOP2AP11388 AP003122.3-201ENST00000526316 255 ntBASIC4.76□□□□□ -1.65
TOP2AP11388 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TOP2AP11388 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.76□□□□□ -1.65
TOP2AP11388 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TOP2AP11388 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TOP2AP11388 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TOP2AP11388 AC105402.1-201ENST00000413336 545 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AC017078.1-201ENST00000416146 368 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 RPS12P5-201ENST00000423449 371 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AL513124.1-201ENST00000450410 614 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 RN7SL330P-201ENST00000469709 307 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AC093278.1-201ENST00000494700 600 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TOP2AP11388 AC005351.1-201ENST00000511152 786 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AP001646.1-201ENST00000527936 915 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AP000916.1-201ENST00000533869 835 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AC008264.2-201ENST00000610193 3731 ntBASIC4.75□□□□□ -1.65
TOP2AP11388 AL031985.3-201ENST00000565390 2449 ntBASIC4.74□□□□□ -1.65
TOP2AP11388 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TOP2AP11388 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.74□□□□□ -1.65
TOP2AP11388 AC116096.1-201ENST00000566804 2314 ntBASIC4.74□□□□□ -1.65
TOP2AP11388 ATF1P1-201ENST00000406040 927 ntBASIC4.74□□□□□ -1.65
TOP2AP11388 AC133473.1-201ENST00000455173 299 ntBASIC4.74□□□□□ -1.65
TOP2AP11388 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP2AP11388 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP2AP11388 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TOP2AP11388 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TOP2AP11388 SNORA3.2-201ENST00000408221 125 ntBASIC4.73□□□□□ -1.65
TOP2AP11388 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.73□□□□□ -1.65
TOP2AP11388 SNRPGP5-201ENST00000456003 220 ntBASIC4.73□□□□□ -1.65
TOP2AP11388 RPL21P41-201ENST00000459863 264 ntBASIC4.73□□□□□ -1.65
TOP2AP11388 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.73□□□□□ -1.65
TOP2AP11388 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
TOP2AP11388 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.73□□□□□ -1.65
TOP2AP11388 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.73□□□□□ -1.65
TOP2AP11388 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TOP2AP11388 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.72□□□□□ -1.65
TOP2AP11388 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
TOP2AP11388 RPS29P6-201ENST00000438196 145 ntBASIC4.72□□□□□ -1.65
TOP2AP11388 IGLVIV-53-201ENST00000520107 367 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms