Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 MIR1911-201ENST00000410783 80 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 RN7SKP33-201ENST00000410942 340 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 RPL23AP46-201ENST00000438548 490 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 EEF1A1P1-201ENST00000447052 739 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 ARPC3P2-201ENST00000457786 533 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 VPS26AP1-201ENST00000483197 979 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 BNIP3P41-201ENST00000503774 571 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC090071.1-201ENST00000507713 644 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC010285.3-201ENST00000511668 676 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC025881.1-201ENST00000518851 512 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 RN7SL600P-201ENST00000581811 299 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC133552.5-201ENST00000604266 540 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC026368.1-201ENST00000614934 690 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 SNX18P1Y-201ENST00000616231 511 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC015871.5-202ENST00000623252 701 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DOAP06340 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DOAP06340 CASC19-284ENST00000642142 1868 ntBASIC5.05□□□□□ -1.6
HLA-DOAP06340 TCP11X1-202ENST00000622971 1372 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 THAP12P5-201ENST00000405864 2275 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 OR10J6P-201ENST00000289731 930 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 Y_RNA.18-201ENST00000362461 102 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 RNU1-20P-201ENST00000363314 162 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 Y_RNA.248-201ENST00000364501 109 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 RNU5E-4P-201ENST00000364931 120 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 RNU6-729P-201ENST00000384399 107 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 RAP1BP3-201ENST00000407180 549 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC068533.2-201ENST00000411872 306 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 OR51A3P-201ENST00000413596 924 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 Z93242.1-201ENST00000427102 353 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 DPPA2P1-201ENST00000428060 556 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 TMX2P1-201ENST00000436507 708 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 MTND4P25-201ENST00000441039 533 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 AL445433.1-201ENST00000457507 257 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 MTAPP1-201ENST00000489154 819 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AL132838.2-201ENST00000492041 314 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC006499.5-201ENST00000505037 514 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 RNY4P37-201ENST00000516225 96 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC018442.3-201ENST00000523025 183 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 ZNF519P3-201ENST00000557158 1032 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC084757.1-201ENST00000559987 490 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC136619.2-201ENST00000563361 631 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AP005205.1-201ENST00000563503 508 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC068135.2-201ENST00000569293 1028 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 AL137072.1-201ENST00000603444 466 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC068276.1-201ENST00000605793 379 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 RNU4-89P-201ENST00000607443 133 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AL451049.1-201ENST00000608672 497 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC007684.1-201ENST00000609671 477 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 MIR7973-1-201ENST00000614683 76 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 MIR7844-201ENST00000616161 122 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 AC025048.6-202ENST00000627667 438 ntBASIC5.04□□□□□ -1.6
HLA-DOAP06340 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DOAP06340 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DOAP06340 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 RNA5SP388-201ENST00000362584 119 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms