Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC138393.1-206ENST00000540997 1886 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 ATP5F1P7-201ENST00000567330 760 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC083899.3-201ENST00000603413 594 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC010591.1-201ENST00000603941 649 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC032011.1-201ENST00000611703 1549 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 U4.6-201ENST00000621618 127 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC112200.1-201ENST00000625015 234 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC004972.1-201ENST00000623934 2209 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 ZNF826P-207ENST00000622273 1910 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 DCAF13P3-201ENST00000561147 1334 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AL512646.1-201ENST00000269395 1077 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 RNU6-1339P-201ENST00000363574 91 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 ATP5A1P2-201ENST00000412323 255 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 DBIP2-201ENST00000419076 262 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 RPL7P53-201ENST00000421245 739 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 MTCO2P1-201ENST00000424648 477 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC018644.1-201ENST00000429934 551 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 ARF4P2-201ENST00000430209 526 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 HMGB3P11-201ENST00000440127 604 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 MTND1P33-201ENST00000446251 917 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 snoU13.7-201ENST00000459220 104 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC015724.1-201ENST00000478577 156 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC098799.1-201ENST00000504752 800 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC008885.2-201ENST00000509506 930 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 RN7SKP18-201ENST00000516005 275 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 RANP9-201ENST00000519957 271 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AP003049.1-201ENST00000529418 457 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC090312.2-201ENST00000582687 378 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC008687.2-201ENST00000597865 520 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC098483.2-201ENST00000603158 454 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AL359535.1-201ENST00000612100 1087 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC039056.2-201ENST00000622261 511 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC092608.3-201ENST00000625017 386 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AL034408.1-202ENST00000636088 415 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 AC017104.5-201ENST00000637647 639 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 SRP72P2-201ENST00000344851 1979 ntBASIC3.05□□□□□ -1.92
HLA-DPB1P04440 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DPB1P04440 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 MTCO1P14-201ENST00000441695 1559 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 ELL2P4-201ENST00000446870 1376 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 DCAF13P1-201ENST00000495256 1330 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 RPL7P26-201ENST00000333817 754 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 Y_RNA.110-201ENST00000363220 99 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 U3.15-201ENST00000365398 212 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 SNORA11C-201ENST00000408532 129 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 NUP35P2-201ENST00000416748 943 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC008173.1-201ENST00000418901 264 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC006960.1-201ENST00000419980 153 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC004865.1-201ENST00000442276 1003 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 RAB11AP1-201ENST00000442978 646 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL133547.1-201ENST00000448546 220 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms