Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL4A1P02462 AL139413.1-201ENST00000421309 217 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 TXNP1-201ENST00000441872 371 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.33□□□□□ -1.88
COL4A1P02462 AL121877.1-201ENST00000453704 622 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 AC243972.3-201ENST00000539655 198 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL4A1P02462 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.33□□□□□ -1.88
COL4A1P02462 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
COL4A1P02462 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL4A1P02462 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL4A1P02462 TAB3P1-202ENST00000452645 1634 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL4A1P02462 MIR518C-201ENST00000384822 101 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 RPL21P3-201ENST00000395517 478 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 AL513328.1-201ENST00000446460 224 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 AC146507.2-201ENST00000460608 476 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 RN7SKP43-201ENST00000516173 320 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.33□□□□□ -1.88
COL4A1P02462 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A1P02462 AC109315.1-201ENST00000584143 1347 ntBASIC3.33□□□□□ -1.88
COL4A1P02462 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
COL4A1P02462 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL4A1P02462 AC116096.1-201ENST00000566804 2314 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 MIR196B-201ENST00000384852 84 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 MIR181B1-201ENST00000385240 110 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.32□□□□□ -1.88
COL4A1P02462 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.32□□□□□ -1.88
COL4A1P02462 AL513043.1-201ENST00000439124 535 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 AP004217.1-201ENST00000480579 346 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 DYNLL1P6-201ENST00000503440 264 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 AC118282.1-201ENST00000506408 765 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 AC119751.1-201ENST00000513357 765 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.32□□□□□ -1.88
COL4A1P02462 COX6B1P6-201ENST00000522347 255 ntBASIC3.32□□□□□ -1.88
COL4A1P02462 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.32□□□□□ -1.88
COL4A1P02462 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.32□□□□□ -1.88
COL4A1P02462 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.32□□□□□ -1.88
COL4A1P02462 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL4A1P02462 AC015813.6-201ENST00000624409 5808 ntBASIC3.31□□□□□ -1.88
COL4A1P02462 MIR1261-201ENST00000408659 82 ntBASIC3.31□□□□□ -1.88
COL4A1P02462 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.31□□□□□ -1.88
COL4A1P02462 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.31□□□□□ -1.88
COL4A1P02462 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.31□□□□□ -1.88
COL4A1P02462 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.31□□□□□ -1.88
COL4A1P02462 AC008549.1-201ENST00000512900 643 ntBASIC3.31□□□□□ -1.88
COL4A1P02462 RNA5SP282-201ENST00000516355 108 ntBASIC3.31□□□□□ -1.88
COL4A1P02462 AP003102.1-201ENST00000525638 661 ntBASIC3.31□□□□□ -1.88
COL4A1P02462 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.31□□□□□ -1.88
COL4A1P02462 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL4A1P02462 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.31□□□□□ -1.88
COL4A1P02462 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.31□□□□□ -1.88
COL4A1P02462 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COL4A1P02462 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.31□□□□□ -1.88
COL4A1P02462 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.31□□□□□ -1.88
COL4A1P02462 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.31□□□□□ -1.88
COL4A1P02462 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL4A1P02462 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 RNA5SP383-201ENST00000362934 120 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 RPL31P1-201ENST00000398116 372 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 HMGB1P25-201ENST00000468402 607 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.3□□□□□ -1.88
COL4A1P02462 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.3□□□□□ -1.88
COL4A1P02462 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.3□□□□□ -1.88
COL4A1P02462 DNAJC19P3-201ENST00000594491 331 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 ASNSP3-201ENST00000451989 1306 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.3□□□□□ -1.88
COL4A1P02462 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL4A1P02462 MAPK10-373ENST00000641983 6772 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL4A1P02462 AL355379.1-201ENST00000405542 640 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
COL4A1P02462 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A1P02462 RPL23AP31-201ENST00000456160 467 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 AC245166.1-201ENST00000521012 253 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A1P02462 AC136601.2-201ENST00000604356 474 ntBASIC3.3□□□□□ -1.88
COL4A1P02462 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A1P02462 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.29□□□□□ -1.88
COL4A1P02462 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL4A1P02462 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
COL4A1P02462 AL445529.1-201ENST00000398713 389 ntBASIC3.29□□□□□ -1.88
COL4A1P02462 AL583834.1-201ENST00000406943 343 ntBASIC3.29□□□□□ -1.88
COL4A1P02462 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.29□□□□□ -1.88
COL4A1P02462 HMGB3P23-201ENST00000414981 585 ntBASIC3.29□□□□□ -1.88
COL4A1P02462 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
COL4A1P02462 AC091544.1-201ENST00000484702 348 ntBASIC3.29□□□□□ -1.88
COL4A1P02462 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms