Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SCN2BO60939 AL645937.1-201ENST00000641739 1652 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 ZNF285B-201ENST00000561698 1767 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
SCN2BO60939 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCN2BO60939 RNA5SP383-201ENST00000362934 120 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SCN2BO60939 RNU6-98P-201ENST00000384173 107 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN2BO60939 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN2BO60939 HMGB3P23-201ENST00000414981 585 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 RPL7P29-201ENST00000437151 728 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC104619.4-201ENST00000510773 249 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 FABP5P12-201ENST00000515543 389 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC025260.1-201ENST00000548858 430 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN2BO60939 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.21□□□□□ -1.9
SCN2BO60939 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 AL079305.1-201ENST00000623159 3008 ntBASIC3.21□□□□□ -1.9
SCN2BO60939 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN2BO60939 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SCN2BO60939 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN2BO60939 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AL365440.1-201ENST00000436135 2167 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN2BO60939 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN2BO60939 SNORD17-201ENST00000390930 237 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 SNORA48.8-201ENST00000391324 134 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 RNA5SP107-201ENST00000411358 122 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 BX890604.2-201ENST00000427883 474 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN2BO60939 ETF1P3-201ENST00000430422 1160 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 RPL21P110-201ENST00000433345 446 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN2BO60939 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN2BO60939 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AC126121.1-201ENST00000482313 553 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN2BO60939 AC008494.2-201ENST00000514544 370 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 RNU1-95P-201ENST00000516357 160 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 RNU1-128P-201ENST00000516704 160 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN2BO60939 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN2BO60939 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN2BO60939 AC005476.1-201ENST00000554427 397 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN2BO60939 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SCN2BO60939 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN2BO60939 AL845331.3-202ENST00000562856 261 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.2□□□□□ -1.9
SCN2BO60939 AC093227.2-201ENST00000589357 285 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN2BO60939 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN2BO60939 AC007566.2-201ENST00000603642 413 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 SUMO2P14-201ENST00000604488 293 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AL365400.2-201ENST00000605604 902 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AC127502.3-201ENST00000636170 1206 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AC009093.8-201ENST00000641769 292 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
SCN2BO60939 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN2BO60939 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN2BO60939 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN2BO60939 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN2BO60939 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SCN2BO60939 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN2BO60939 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN2BO60939 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN2BO60939 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
SCN2BO60939 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN2BO60939 METTL21EP-201ENST00000298105 713 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 RNA5SP124-201ENST00000362739 110 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 Y_RNA.126-201ENST00000363382 111 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCN2BO60939 FABP12P1-201ENST00000401911 322 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 AL583834.1-201ENST00000406943 343 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 MIR1303-201ENST00000408625 86 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN2BO60939 KCTD10P1-201ENST00000434203 625 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 ISCA1P2-201ENST00000438679 421 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 HMGB3P11-201ENST00000440127 604 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN2BO60939 SSXP4-201ENST00000451349 245 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 HMGN1P18-201ENST00000457642 277 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 RPL7P15-201ENST00000461190 712 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 AP002884.2-201ENST00000471647 395 ntBASIC3.19□□□□□ -1.9
SCN2BO60939 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SCN2BO60939 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms