Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX1O00570 AL683813.2-201ENST00000605245 502 ntBASIC5.85□□□□□ -1.47
SOX1O00570 AL080274.1-201ENST00000605565 220 ntBASIC5.85□□□□□ -1.47
SOX1O00570 AL355472.4-201ENST00000610233 626 ntBASIC5.85□□□□□ -1.47
SOX1O00570 AC005899.7-201ENST00000618199 588 ntBASIC5.85□□□□□ -1.47
SOX1O00570 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX1O00570 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SOX1O00570 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SOX1O00570 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SOX1O00570 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SOX1O00570 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX1O00570 THAP12P9-201ENST00000503971 2360 ntBASIC5.84□□□□□ -1.47
SOX1O00570 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 Y_RNA.100-201ENST00000363141 102 ntBASIC5.84□□□□□ -1.47
SOX1O00570 RNU6-1297P-201ENST00000384415 104 ntBASIC5.84□□□□□ -1.47
SOX1O00570 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SOX1O00570 U3.22-201ENST00000391120 215 ntBASIC5.84□□□□□ -1.47
SOX1O00570 RPL31P52-201ENST00000407532 367 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 MTND3P16-201ENST00000452205 344 ntBASIC5.84□□□□□ -1.47
SOX1O00570 HMGB1P4-201ENST00000455362 567 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX1O00570 DUTP1-201ENST00000493631 470 ntBASIC5.84□□□□□ -1.47
SOX1O00570 RNA5SP373-201ENST00000517271 95 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.84□□□□□ -1.47
SOX1O00570 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX1O00570 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.84□□□□□ -1.47
SOX1O00570 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX1O00570 AC115085.1-201ENST00000588924 229 ntBASIC5.84□□□□□ -1.47
SOX1O00570 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 AL627309.6-201ENST00000606857 840 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AL391813.2-201ENST00000609113 322 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX1O00570 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 AC084781.2-201ENST00000615568 161 ntBASIC5.84□□□□□ -1.47
SOX1O00570 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 OR2L1P-202ENST00000641567 1023 ntBASIC5.84□□□□□ -1.47
SOX1O00570 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX1O00570 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
SOX1O00570 AC134882.1-201ENST00000603738 1676 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AC092447.10-201ENST00000620607 1652 ntBASIC5.84□□□□□ -1.47
SOX1O00570 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX1O00570 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SOX1O00570 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SOX1O00570 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.84□□□□□ -1.48
SOX1O00570 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
SOX1O00570 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
SOX1O00570 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.84□□□□□ -1.48
SOX1O00570 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.84□□□□□ -1.48
SOX1O00570 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
SOX1O00570 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX1O00570 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX1O00570 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 AL731556.1-201ENST00000394628 3711 ntBASIC5.83□□□□□ -1.48
SOX1O00570 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 AL161781.1-201ENST00000354277 403 ntBASIC5.83□□□□□ -1.48
SOX1O00570 Y_RNA.133-201ENST00000363428 110 ntBASIC5.83□□□□□ -1.48
SOX1O00570 RNU6-639P-201ENST00000384074 107 ntBASIC5.83□□□□□ -1.48
SOX1O00570 Y_RNA.445-201ENST00000384168 102 ntBASIC5.83□□□□□ -1.48
SOX1O00570 RNU6-921P-201ENST00000384361 107 ntBASIC5.83□□□□□ -1.48
SOX1O00570 RNU6-316P-201ENST00000391027 107 ntBASIC5.83□□□□□ -1.48
SOX1O00570 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 Y_RNA.615-201ENST00000410769 117 ntBASIC5.83□□□□□ -1.48
SOX1O00570 PRELID3BP11-201ENST00000414230 479 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 AL161631.1-201ENST00000417933 486 ntBASIC5.83□□□□□ -1.48
SOX1O00570 HSPE1P1-201ENST00000421494 318 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.83□□□□□ -1.48
SOX1O00570 MTCO3P21-201ENST00000430791 643 ntBASIC5.83□□□□□ -1.48
SOX1O00570 RPL37P1-201ENST00000432310 284 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX1O00570 ERLEC1P1-201ENST00000433806 578 ntBASIC5.83□□□□□ -1.48
SOX1O00570 HSPE1P28-201ENST00000443139 211 ntBASIC5.83□□□□□ -1.48
SOX1O00570 Z92846.1-201ENST00000456203 268 ntBASIC5.83□□□□□ -1.48
SOX1O00570 SNORA84-201ENST00000459229 133 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX1O00570 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms