Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC025260.1-201ENST00000548858 430 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC106785.3-201ENST00000564064 847 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AF131215.7-201ENST00000602443 707 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC005014.3-201ENST00000605985 190 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL158211.2-201ENST00000607282 395 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL163051.2-201ENST00000618976 735 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 MIR8057-201ENST00000620957 69 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC090617.9-201ENST00000623751 147 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP001148.1-201ENST00000624124 2359 ntBASIC3.36□□□□□ -1.87
TMX2-CTNND1H3BSU7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNA5SP42-201ENST00000364278 115 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNA5SP235-201ENST00000365411 114 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 HSFY4P-201ENST00000415994 1181 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC022022.1-201ENST00000430304 178 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 TVP23BP2-201ENST00000455082 615 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 TRBV8-2-201ENST00000475637 270 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC078785.3-201ENST00000476607 425 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC015908.1-201ENST00000478739 476 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC093663.1-201ENST00000497190 394 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC010468.3-201ENST00000508225 458 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 SNORA76.2-201ENST00000517095 137 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP006245.1-201ENST00000522549 120 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC023161.2-201ENST00000551218 780 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 MIR1264-201ENST00000616374 69 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP002371.2-201ENST00000624450 503 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMX2-CTNND1H3BSU7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNU6-244P-201ENST00000391028 104 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 U3.39-201ENST00000408569 239 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AIMP1P1-201ENST00000418670 937 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 UBE2V1P6-201ENST00000430840 422 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 BTF3P5-201ENST00000457252 467 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 RPS4XP10-201ENST00000465034 731 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 RN7SL594P-201ENST00000470590 287 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL136126.1-201ENST00000473603 402 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 RPS4XP22-201ENST00000480755 780 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 OR9N1P-202ENST00000494289 481 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms