Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC008885.2-201ENST00000509506 930 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 RN7SKP13-201ENST00000515933 244 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 MIR2114-201ENST00000516645 80 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 SCARNA1-201ENST00000517138 166 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 HMGB1P1-201ENST00000522557 636 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AL121766.1-201ENST00000547436 487 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC084757.1-201ENST00000559987 490 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC009101.1-201ENST00000568135 242 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 RN7SL339P-201ENST00000580597 296 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 MIR4512-201ENST00000583257 77 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC020914.6-201ENST00000594327 272 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AL020997.3-201ENST00000602843 359 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 RPAP2P1-201ENST00000603626 1168 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AL121652.1-201ENST00000608851 448 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AP000240.1-201ENST00000609910 452 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC243756.2-201ENST00000618406 463 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC243312.2-201ENST00000623340 601 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC090772.4-201ENST00000623599 362 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 U6.105-201ENST00000637379 88 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 SNORA51.12-201ENST00000384448 134 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AL138878.1-201ENST00000405131 347 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 PAICSP7-201ENST00000419829 962 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC245054.1-201ENST00000420944 258 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 RPL7P53-201ENST00000421245 739 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 RPL21P110-201ENST00000433345 446 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AF228730.2-201ENST00000438784 848 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AL592437.1-201ENST00000443781 492 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 EXTL2P1-201ENST00000446218 416 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 PRDX3P3-201ENST00000447765 522 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 CYCSP35-201ENST00000451978 304 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC010683.1-201ENST00000473673 378 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 MTND6P6-201ENST00000478031 263 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AP001207.2-201ENST00000519490 539 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 NIFKP8-201ENST00000560500 874 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC245884.10-201ENST00000597355 337 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC009948.4-201ENST00000604692 675 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC012468.1-201ENST00000604888 430 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AP003392.5-201ENST00000607857 415 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AL392088.2-201ENST00000637607 285 ntBASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEDD8-MDP1E9PL57 AC093908.1-201ENST00000623125 8092 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU6-761P-201ENST00000384148 107 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU1-89P-201ENST00000384592 164 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RPL7P27-201ENST00000403775 720 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 HNRNPDP2-201ENST00000406475 478 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RN7SKP56-201ENST00000410513 331 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU6-575P-201ENST00000411326 105 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC004022.2-201ENST00000413824 193 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RPS7P9-201ENST00000414704 586 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 HMGB3P20-201ENST00000417997 600 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms