Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC073569.3-201ENST00000619055 682 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AC091953.5-201ENST00000622919 233 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 MTND4P31-201ENST00000425607 1343 ntBASIC3.59□□□□□ -1.83
SMIM28A0A1B0GU29 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 AC027287.1-201ENST00000553115 1453 ntBASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC007529.1-201ENST00000418574 2178 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 SNORA63.3-201ENST00000362682 132 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AL357075.1-201ENST00000404107 726 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AL590290.1-201ENST00000405336 380 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC063979.1-201ENST00000415539 377 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC008173.1-201ENST00000418901 264 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC008565.1-201ENST00000509046 885 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 PHBP14-201ENST00000512887 367 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC037471.2-201ENST00000564941 598 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 ZNF415P1-201ENST00000582279 1166 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 PCNAP1-202ENST00000595299 752 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC069304.3-201ENST00000603938 1084 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC104446.1-201ENST00000613728 1321 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 OR11H5P-202ENST00000641612 1325 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC119744.1-201ENST00000454746 1715 ntBASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.58□□□□□ -1.84
SMIM28A0A1B0GU29 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 RN7SKP44-201ENST00000363602 316 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC006994.1-201ENST00000438212 839 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 RPL21P18-201ENST00000469899 480 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 RN7SL504P-201ENST00000494496 287 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 NAMPTP2-201ENST00000505629 1115 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC110794.1-201ENST00000505816 425 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 SNORA74D-201ENST00000516404 141 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 CYP2C60P-201ENST00000566088 139 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC090751.1-201ENST00000566966 267 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC015917.1-201ENST00000579654 510 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC134882.1-201ENST00000603738 1676 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC073657.2-201ENST00000605661 303 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 AC096586.1-201ENST00000610267 561 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 uc_338.32-201ENST00000615087 172 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 STMN1P1-201ENST00000617809 440 ntBASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMIM28A0A1B0GU29 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms