Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 RNA5SP399-201ENST00000364003 117 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AL356967.1-201ENST00000406305 431 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 MTCO3P12-201ENST00000416718 547 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 USP12PY-201ENST00000427677 1064 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 MTCO1P54-201ENST00000430139 712 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 TBCAP1-201ENST00000436520 327 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC000041.1-201ENST00000439655 175 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AL662791.1-201ENST00000441992 928 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 CFTRP1-201ENST00000456646 183 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 HMGN2P16-201ENST00000456802 261 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 PPIAP15-201ENST00000479662 484 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AL024509.2-201ENST00000493462 493 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC091860.1-201ENST00000505723 432 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC010342.1-201ENST00000514047 877 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AP000790.1-201ENST00000528891 737 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 OR4R2P-201ENST00000530815 597 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC084824.1-201ENST00000550917 1005 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 GAS5-AS1-201ENST00000602767 694 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AC128687.2-201ENST00000609657 566 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 AL512506.2-201ENST00000624472 458 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLCA3PQ9Y6N3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AL672296.1-201ENST00000427780 2158 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 OR4A15-201ENST00000314706 1035 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 RNA5SP515-201ENST00000364570 118 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 RNA5SP235-201ENST00000365411 114 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 RNU6-730P-201ENST00000383954 104 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AL355615.1-201ENST00000406187 641 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AP000567.1-201ENST00000406413 156 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 Z97055.1-201ENST00000419730 712 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 RPS7P2-201ENST00000435134 607 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 SNORA71B-202ENST00000439232 272 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 HMGB1P37-201ENST00000439613 609 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AC017099.1-201ENST00000448261 1028 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AC010285.1-201ENST00000470580 392 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AC010301.1-201ENST00000473936 355 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 RPS4XP15-201ENST00000489210 795 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 SNORA31.20-201ENST00000517111 133 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 OR4A12P-201ENST00000530847 918 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AC093519.1-201ENST00000566109 298 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 SNORD39.3-201ENST00000584451 71 ntBASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCA3PQ9Y6N3 AC022916.3-201ENST00000592961 742 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms