Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL133217.1-201ENST00000450980 425 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 RPL37P3-201ENST00000456825 293 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AL133477.1-201ENST00000457472 514 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 FTH1P21-201ENST00000512179 511 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC008837.2-201ENST00000513076 418 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 HNRNPKP5-201ENST00000515300 253 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 IGKV2-36-201ENST00000519999 223 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC087373.1-201ENST00000524920 491 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC109446.2-201ENST00000567872 497 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC079171.1-201ENST00000568788 914 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC010680.4-201ENST00000605334 543 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AL392048.1-201ENST00000613946 534 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC023158.2-201ENST00000614876 543 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC008785.1-201ENST00000624475 456 ntBASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX9Q9Y5X1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 RNA5SP388-201ENST00000362584 119 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 RNU6-560P-201ENST00000364007 108 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 RAP1BP1-201ENST00000412709 553 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC004022.2-201ENST00000413824 193 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 TBCAP1-201ENST00000436520 327 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 YWHAQP9-201ENST00000445891 512 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 RPS11P1-201ENST00000451072 473 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC010468.1-201ENST00000461022 817 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 BET1P1-201ENST00000482276 359 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC110792.1-201ENST00000491826 472 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC106872.2-201ENST00000494303 480 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC139783.2-201ENST00000504847 1145 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC017037.1-201ENST00000508460 471 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 IFITM8P-201ENST00000522529 394 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 Z94722.1-201ENST00000604328 474 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC064807.4-201ENST00000607201 407 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC105227.2-201ENST00000615075 605 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 MIR6875-201ENST00000617506 72 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC131159.1-201ENST00000621854 213 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AL359715.5-201ENST00000623431 443 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 AC008725.1-201ENST00000605123 2263 ntBASIC4.32□□□□□ -1.72
SNX9Q9Y5X1 MAPK10-253ENST00000641010 4072 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC022031.1-201ENST00000585985 2593 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms