Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 OR8K4P-201ENST00000534608 872 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 MIR4286-201ENST00000580651 93 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 AC022069.1-201ENST00000582910 658 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 AL669831.4-202ENST00000590817 238 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 RMST_8.1-201ENST00000610287 165 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 MIR6810-201ENST00000622701 70 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 AL356118.1-201ENST00000635272 1078 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
RHBDD3Q9Y3P4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 RNU6-374P-201ENST00000364146 108 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 MTCO3P31-201ENST00000405526 789 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 RAB28P1-201ENST00000411517 641 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 UBE2V1P9-201ENST00000414760 368 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 MTCO3P12-201ENST00000416718 547 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 HSFY1P1-201ENST00000423928 1178 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AL390879.2-203ENST00000426943 1121 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC096632.1-201ENST00000427395 310 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 TRIM60P13-201ENST00000432350 1283 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AL645931.1-201ENST00000439737 410 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 NUTF2P7-201ENST00000453086 375 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 UBDP1-202ENST00000457888 382 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AL109653.1-201ENST00000603091 248 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC005344.1-201ENST00000613391 459 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 MIR1264-201ENST00000616374 69 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 AC097372.4-201ENST00000625025 466 ntBASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
RHBDD3Q9Y3P4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AF117829.1-206ENST00000621883 3802 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 RNA5SP235-201ENST00000365411 114 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 RNU6-1226P-201ENST00000384317 107 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL590704.1-201ENST00000402856 794 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 OSTCP5-201ENST00000425293 453 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL591419.1-201ENST00000427423 339 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC006548.1-201ENST00000427470 102 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 RPS29P7-201ENST00000439662 171 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 RSL24D1P2-201ENST00000445584 366 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 DNAJC19P8-201ENST00000452887 259 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 MTND2P6-201ENST00000455337 1030 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 ARPC3P2-201ENST00000457786 533 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC022034.3-201ENST00000471393 478 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC025181.1-201ENST00000477507 416 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 FCF1P3-201ENST00000496394 590 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC093853.1-201ENST00000515689 483 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 RNU6-202P-201ENST00000515998 96 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 SNORA31.20-201ENST00000517111 133 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC008011.1-201ENST00000545989 227 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL121766.1-201ENST00000547436 487 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms