Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 PCNAP1-202ENST00000595299 752 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 BNIP3P38-201ENST00000601117 544 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 NTAN1P1-201ENST00000603150 646 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC099778.2-201ENST00000610904 211 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC012531.5-201ENST00000611375 151 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC073569.3-201ENST00000619055 682 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 RNA5SP383-201ENST00000362934 120 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 U3.39-201ENST00000408569 239 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 RNU2-65P-201ENST00000410162 185 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC093578.1-201ENST00000415219 368 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC234782.4-201ENST00000417646 1048 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC245291.1-201ENST00000419501 328 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 FABP5P3-201ENST00000437960 408 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AL138799.3-201ENST00000438968 350 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 ACTR3P3-201ENST00000480448 893 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC092185.1-201ENST00000491371 97 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 RPL30P11-201ENST00000495304 339 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC114967.1-201ENST00000504890 259 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 MTATP6P22-201ENST00000507369 598 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 RNU2-27P-201ENST00000516185 142 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 RNU6-334P-201ENST00000517072 102 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 MTCO1P49-201ENST00000523429 802 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 OR4A2P-201ENST00000527276 913 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC092451.2-201ENST00000538746 658 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AP003717.3-201ENST00000544832 1180 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC006130.2-201ENST00000586202 326 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC007687.1-201ENST00000602704 304 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 LLPHP1-201ENST00000603571 367 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC026741.1-201ENST00000605892 482 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC120053.1-201ENST00000607706 736 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC021851.1-201ENST00000608537 1082 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC112503.2-201ENST00000609005 552 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC096586.1-201ENST00000610267 561 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AL121772.2-201ENST00000614331 297 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC068880.4-201ENST00000623082 495 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 AC110801.1-201ENST00000623590 212 ntBASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAPPC4Q9Y296 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC068647.1-201ENST00000489539 2265 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC104446.1-201ENST00000613728 1321 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AL353746.1-201ENST00000566293 6881 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 Y_RNA.126-201ENST00000363382 111 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 MIR554-201ENST00000384874 96 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC069218.2-201ENST00000411665 344 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 HMGB3P23-201ENST00000414981 585 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AL031736.2-201ENST00000426573 787 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AL445584.1-201ENST00000431451 330 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 KCTD10P1-201ENST00000434203 625 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AL096829.2-201ENST00000446582 742 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC020898.1-201ENST00000474167 787 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC015908.1-201ENST00000478739 476 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 RPL21P103-201ENST00000479921 488 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 AC092451.1-201ENST00000480211 153 ntBASIC3.23□□□□□ -1.89
TRAPPC4Q9Y296 FTH1P24-201ENST00000503502 462 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms