Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 SCARNA16.2-201ENST00000516520 172 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 SETP7-201ENST00000552169 453 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 LSM6P2-201ENST00000552208 177 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 AC010201.1-201ENST00000605051 540 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 MIR7155-201ENST00000615925 56 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 AC055839.1-201ENST00000634467 498 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 PABPC1P6-201ENST00000445594 1829 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 MTND5P6-201ENST00000422338 1798 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 AC090220.1-201ENST00000593078 1699 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 MAPK10-344ENST00000641718 3746 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 SNORD115-7-201ENST00000365306 82 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 Y_RNA.473-201ENST00000384333 102 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 MIR649-201ENST00000384843 97 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AL139095.3-201ENST00000419672 1203 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 snoU13.8-201ENST00000458890 104 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 RN7SL826P-201ENST00000479724 288 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 RN7SL809P-201ENST00000482040 297 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AC008953.1-201ENST00000497334 318 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 RPS27AP18-201ENST00000515536 459 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 MIR5095-201ENST00000578844 88 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 PRNCR1-201ENST00000635449 12727 ntBASIC8.13□□□□□ -1.11
PHF8Q9UPP1 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PHF8Q9UPP1 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 LINC02019-201ENST00000608605 2060 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 RNU6-1287P-201ENST00000362914 107 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 RNU6-187P-201ENST00000384139 106 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 RNU6-1060P-201ENST00000384664 107 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 RNA5SP219-201ENST00000390940 113 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AL583834.1-201ENST00000406943 343 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 RBMY1KP-201ENST00000423480 476 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AL132765.1-201ENST00000434165 553 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 HIGD1AP11-201ENST00000438361 280 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AC090686.1-201ENST00000481577 749 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 RN7SL547P-201ENST00000490793 290 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AC020910.3-201ENST00000603701 874 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AC009779.6-201ENST00000603972 165 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AL031320.1-201ENST00000604177 357 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AC145423.1-201ENST00000605712 336 ntBASIC8.12□□□□□ -1.11
PHF8Q9UPP1 AL139099.4-201ENST00000614802 114 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms