Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 CEP170P1-201ENST00000502249 4587 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AL133383.2-201ENST00000622958 2336 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 RNU6-374P-201ENST00000364146 108 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 SNORA70C-201ENST00000384538 135 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 MCTS2P-201ENST00000394552 546 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC092638.1-201ENST00000411966 1275 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 RPS3AP9-201ENST00000417027 792 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 HMGB3P20-201ENST00000417997 600 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC114973.1-201ENST00000429057 632 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC044797.1-201ENST00000445744 679 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 RPL7P59-201ENST00000447700 943 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC006480.1-201ENST00000449887 378 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 HMGB3P30-201ENST00000457863 606 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC092902.1-201ENST00000486999 259 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 RPS3AP50-201ENST00000487064 803 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 RNU5A-7P-201ENST00000515979 116 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 RNU6-467P-201ENST00000517027 110 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AP003355.1-201ENST00000518956 587 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 HMGB1P1-201ENST00000522557 636 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AL139174.1-201ENST00000531489 886 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 CR383656.14-201ENST00000551951 406 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 PARP1P2-201ENST00000556806 195 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC006960.3-201ENST00000561845 705 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC120057.2-201ENST00000571520 271 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 BPTFP1-201ENST00000579209 492 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 SRP72P2-201ENST00000344851 1979 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AC007496.3-201ENST00000624987 3443 ntBASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COPS3Q9UNS2 AF127577.6-201ENST00000623352 2191 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AL121657.1-201ENST00000327215 531 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RNU6-619P-201ENST00000365146 108 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RNU6-441P-201ENST00000384545 106 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 MIR16-1-201ENST00000385271 89 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RNA5SP424-201ENST00000390988 115 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AL022722.2-201ENST00000402519 180 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 Y_RNA.625-201ENST00000411256 107 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 TOMM22P1-201ENST00000418578 312 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AL138799.3-201ENST00000438968 350 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RPS26P56-201ENST00000444468 240 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 NPM1P49-201ENST00000448027 714 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RPL6P9-201ENST00000466502 859 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RPL7P19-201ENST00000469948 618 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC015908.1-201ENST00000478739 476 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC026979.1-201ENST00000492525 396 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC005726.1-201ENST00000494679 427 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RN7SKP122-201ENST00000515923 296 ntBASIC3.29□□□□□ -1.88
COPS3Q9UNS2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COPS3Q9UNS2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms