Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP002001.2-201ENST00000529025 1469 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 MAPK10-253ENST00000641010 4072 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 CYP1D1P-201ENST00000416662 1433 ntBASIC4.21□□□□□ -1.73
SIX4Q9UIU6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.21□□□□□ -1.73
SIX4Q9UIU6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
SIX4Q9UIU6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC097504.1-201ENST00000515103 2415 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 HMGB1P5-201ENST00000255320 642 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 RNU6-619P-201ENST00000365146 108 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 RNA5SP80-201ENST00000410475 111 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 RNA5SP306-201ENST00000411087 107 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 OR51A3P-201ENST00000413596 924 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 RPL7P44-201ENST00000424827 742 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL593851.1-201ENST00000426171 157 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC073069.1-201ENST00000428657 441 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 Z74696.2-201ENST00000436514 498 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 RNU7-125P-201ENST00000458760 62 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 RPL23AP71-201ENST00000470966 469 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC005912.1-201ENST00000495392 255 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC104090.1-201ENST00000506341 1171 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AP000619.3-201ENST00000535634 1127 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC125611.1-201ENST00000549563 229 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 HIGD1AP17-201ENST00000554576 276 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC090888.1-201ENST00000561335 1141 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 NTAN1P1-201ENST00000603150 646 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL031281.1-201ENST00000604049 488 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC121247.2-201ENST00000604776 136 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC010200.2-201ENST00000605098 235 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL158042.1-201ENST00000605338 460 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL139418.1-201ENST00000613613 177 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC023158.2-201ENST00000614876 543 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AL603755.1-201ENST00000619504 163 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 MIR4278-201ENST00000636094 69 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AC007671.2-201ENST00000637344 619 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 OR8B1P-202ENST00000641132 1178 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 AP000776.1-201ENST00000530032 1663 ntBASIC4.21□□□□□ -1.74
SIX4Q9UIU6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SIX4Q9UIU6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 SGO1P2-201ENST00000429458 1589 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 RHOT1P2-201ENST00000366423 333 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 OR52E6-202ENST00000379946 954 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AL139421.1-201ENST00000423010 169 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 DPRXP1-201ENST00000426312 460 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 RPL7P4-203ENST00000430239 730 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 MTND3P1-201ENST00000441336 220 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 KATNBL1P3-201ENST00000443475 909 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 RPS17P13-201ENST00000448974 407 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms