Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTNNA3Q9UI47 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 MTATP6P31-201ENST00000406985 692 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 RN7SKP111-201ENST00000410349 271 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 RNU4-74P-201ENST00000411280 161 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AL512504.1-201ENST00000415494 778 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 LIPT1P1-201ENST00000415870 1186 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 RPS15AP6-201ENST00000420703 385 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AL158071.1-201ENST00000430315 461 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AL035458.1-201ENST00000433096 585 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 NCOR1P1-202ENST00000486162 291 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 COX6B1P6-201ENST00000522347 255 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 MTND5P21-201ENST00000531961 522 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 OR5B10P-201ENST00000532869 642 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 ZNF192P1-203ENST00000565888 810 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC024023.1-201ENST00000624530 922 ntBASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA3Q9UI47 AC000367.1-201ENST00000452711 1766 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AL049781.1-201ENST00000623195 3585 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 RSL24D1P1-201ENST00000404972 493 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC017079.2-201ENST00000416102 485 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC245052.5-201ENST00000416320 649 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 FO393419.3-201ENST00000428741 282 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 OR51AB1P-201ENST00000429046 620 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 UBE2V2P3-201ENST00000433562 437 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 BX276092.4-201ENST00000452056 248 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 RPL6P9-201ENST00000466502 859 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 RPS29P2-201ENST00000479278 136 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AP000563.1-201ENST00000490865 758 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 FCF1P3-201ENST00000496394 590 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC098799.1-201ENST00000504752 800 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC011602.1-201ENST00000546484 331 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC074029.1-201ENST00000552531 1044 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 AC006557.5-201ENST00000603126 811 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 SCARNA15.3-201ENST00000626315 122 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 SCARNA4.1-201ENST00000628597 123 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 U6.98-201ENST00000637157 84 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 PWAR6-201ENST00000552334 4618 ntBASIC4.14□□□□□ -1.75
CTNNA3Q9UI47 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 ZNF826P-207ENST00000622273 1910 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 HSPA8P19-201ENST00000505359 1517 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 AC010385.1-201ENST00000412374 256 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 RANP4-201ENST00000413361 655 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 ATP5JP1-201ENST00000431631 322 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 RN7SL601P-201ENST00000471221 293 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 AC017015.1-201ENST00000477387 286 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 SETP6-201ENST00000479329 568 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 RNU6-889P-201ENST00000517189 103 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 HMGB1P46-201ENST00000520062 610 ntBASIC4.13□□□□□ -1.75
CTNNA3Q9UI47 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms