Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 RNA5SP391-201ENST00000363456 119 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 GSTA12P-201ENST00000402398 508 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC007899.1-201ENST00000412776 775 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 RPF2P1-201ENST00000424137 906 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 FTH1P1-201ENST00000437933 532 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AL662791.1-201ENST00000441992 928 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 RPS27P29-201ENST00000463110 252 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC092754.2-201ENST00000463506 460 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 RPL21P12-201ENST00000559810 515 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 MIR548Y-201ENST00000582739 110 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 MIR3158-1-201ENST00000583596 81 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 CKS1BP3-201ENST00000600888 237 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC015849.2-201ENST00000605738 409 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 AC239803.2-201ENST00000610161 430 ntBASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS29Q9UBQ0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 MIR148B-201ENST00000362252 99 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 U3.6-201ENST00000363622 211 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 RNU6-185P-201ENST00000384421 107 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 MIR449B-201ENST00000384995 97 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 MIR607-201ENST00000385241 96 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 MIR591-201ENST00000385290 95 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 TAF9BP1-201ENST00000396646 746 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC063979.1-201ENST00000415539 377 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC241520.1-201ENST00000422654 1099 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC097713.2-201ENST00000430199 356 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AL159987.2-201ENST00000432754 307 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 HMGB1P45-201ENST00000435986 653 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 MED6P1-201ENST00000439659 713 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC008155.2-201ENST00000464337 397 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 NCOR1P1-202ENST00000486162 291 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC093755.1-201ENST00000512950 1023 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC245166.1-201ENST00000521012 253 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC025857.1-201ENST00000525252 377 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 OR8L1P-201ENST00000534005 955 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC090425.2-201ENST00000608818 501 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 AF117829.1-206ENST00000621883 3802 ntBASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VPS29Q9UBQ0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 OR1S2-201ENST00000302592 978 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 HNRNPDP2-201ENST00000406475 478 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AL050321.1-201ENST00000432363 400 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 CKS1BP5-201ENST00000434172 273 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 HMGB3P6-201ENST00000444896 598 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 Z95327.1-201ENST00000446082 482 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC069540.1-201ENST00000446320 988 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 SLC31A1P1-201ENST00000451221 567 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 PTGES3P5-201ENST00000455109 434 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 OR7L1P-201ENST00000456181 380 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 RPL31P13-201ENST00000484151 370 ntBASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS29Q9UBQ0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms