Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 CDR1-202ENST00000625883 1485 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 MIR448-201ENST00000362131 111 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 SNORA31-201ENST00000362607 130 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-413P-201ENST00000384115 107 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 RNU1-13P-201ENST00000384499 162 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 RPS26P8-201ENST00000393490 348 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AL603766.1-201ENST00000407763 664 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 COX6CP17-201ENST00000421389 185 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 GSTA7P-201ENST00000438425 448 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC069285.2-201ENST00000440210 275 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 RPL5P32-201ENST00000454085 879 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 RFC5P1-201ENST00000454419 874 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 DUXAP8-207ENST00000456786 622 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 RPS7P7-201ENST00000463499 571 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 FTH1P9-201ENST00000513251 355 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC135001.1-201ENST00000544546 283 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC007424.1-203ENST00000554613 687 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 GNRHR2P1-201ENST00000555315 631 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 DUXAP10-204ENST00000612052 616 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC022509.4-201ENST00000621404 572 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 AC106754.1-201ENST00000562632 1513 ntBASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.45□□□□□ -1.7
BLOC1S4Q9NUP1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 NACA3P-201ENST00000359690 648 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 MIR372-201ENST00000362225 67 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 SNORD82-201ENST00000365530 70 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-821P-201ENST00000390995 107 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RPL21P65-201ENST00000406094 466 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RNU4-6P-201ENST00000410804 122 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RNA5SP104-201ENST00000410989 118 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RNA5SP39-201ENST00000411245 120 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RPS3AP37-201ENST00000419176 745 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 HSFY1P1-201ENST00000423928 1178 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 USP9YP24-201ENST00000434374 697 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 EEF1A1P39-201ENST00000440791 250 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 ELOCP13-201ENST00000443934 329 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 USP9YP17-201ENST00000444617 696 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 MTCO2P25-201ENST00000447065 681 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 NCOR1P1-202ENST00000486162 291 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RPS26P15-201ENST00000488067 348 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 HNRNPKP5-201ENST00000515300 253 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 NDUFA5P2-201ENST00000519723 344 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC087369.1-201ENST00000520775 996 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC091516.1-201ENST00000549191 703 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 TRAV15-201ENST00000556680 249 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC011458.1-201ENST00000604034 617 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AL160237.3-201ENST00000604114 1013 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RNU4-89P-201ENST00000607443 133 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC233309.1-201ENST00000619522 751 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 RNA5SP196-201ENST00000625967 102 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 CYP3A51P-201ENST00000633513 256 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 AC087190.4-201ENST00000574616 8334 ntBASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
BLOC1S4Q9NUP1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms