Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AL049693.1-201ENST00000402760 611 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 SPTLC1P2-201ENST00000407089 121 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 U3.36-201ENST00000408418 213 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 RN7SKP285-201ENST00000410137 318 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 RN7SKP126-201ENST00000411143 300 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AL589872.1-201ENST00000426602 288 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC073464.1-201ENST00000429823 534 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 UBE2V1P13-201ENST00000436983 439 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 Z99127.3-201ENST00000448158 395 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 PRPF38AP1-201ENST00000451976 933 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC146507.1-201ENST00000468335 354 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC087385.1-201ENST00000475062 312 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC008953.1-201ENST00000497334 318 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 NPM1P41-201ENST00000512920 831 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AP001893.2-201ENST00000526949 202 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 OR5BC1P-201ENST00000529327 739 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AL845331.3-202ENST00000562856 261 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 BGLT3-201ENST00000564523 994 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 RN7SL708P-201ENST00000580952 299 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC011840.5-201ENST00000582125 771 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 YWHAQP7-201ENST00000603536 658 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC011626.1-201ENST00000604710 562 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC113194.1-201ENST00000606037 500 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 BX664608.1-201ENST00000610519 487 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AL359880.1-201ENST00000621879 266 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC079597.1-201ENST00000624306 508 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 AC073136.1-201ENST00000449426 2884 ntBASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM39Q9HCM9 IQCB2P-201ENST00000401788 1633 ntBASIC5.15□□□□□ -1.58
TRIM39Q9HCM9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.15□□□□□ -1.58
TRIM39Q9HCM9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TRIM39Q9HCM9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM39Q9HCM9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM39Q9HCM9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM39Q9HCM9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM39Q9HCM9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 RNA5SP241-201ENST00000391326 114 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 EI24P4-201ENST00000423683 1078 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC000111.3-201ENST00000433478 193 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AL451074.3-201ENST00000437709 472 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AL136380.1-201ENST00000447970 162 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC010733.1-201ENST00000451515 401 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 SAP18P1-201ENST00000512058 390 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 PTP4A1P6-201ENST00000531034 478 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 MIR4472-2-201ENST00000582069 67 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC104687.2-201ENST00000604442 342 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AP001596.2-201ENST00000608410 312 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC007014.2-201ENST00000615581 479 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 AC109780.1-201ENST00000451768 1344 ntBASIC5.15□□□□□ -1.59
TRIM39Q9HCM9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms