Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AL352979.3-201ENST00000553515 247 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC233702.9-201ENST00000581528 203 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC008277.2-201ENST00000605196 797 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AL136295.6-201ENST00000610486 658 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 MIR3662-201ENST00000637030 95 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDK5RAP1Q96SZ6 SMG1P6-201ENST00000532337 2930 ntBASIC5.09□□□□□ -1.6
CDK5RAP1Q96SZ6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.09□□□□□ -1.6
CDK5RAP1Q96SZ6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CDK5RAP1Q96SZ6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CDK5RAP1Q96SZ6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDK5RAP1Q96SZ6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 ENSAP3-201ENST00000312710 333 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 RNA5SP88-201ENST00000365560 109 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SKP100-201ENST00000411258 284 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 RPL37P18-201ENST00000411602 243 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 BX510359.2-201ENST00000417920 305 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AL356583.2-201ENST00000426536 280 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 NRBF2P3-201ENST00000432731 865 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC000111.2-201ENST00000448200 210 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 RPL39P6-201ENST00000448289 150 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 CDH12P2-201ENST00000504393 298 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC111000.3-201ENST00000508057 576 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 OR4A45P-201ENST00000529954 901 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 ARL2BPP2-201ENST00000550907 489 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC020914.6-201ENST00000594327 272 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AL121932.1-201ENST00000605542 214 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 ATE1-AS1-202ENST00000636460 506 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 AC004817.4-201ENST00000602396 3625 ntBASIC5.08□□□□□ -1.6
CDK5RAP1Q96SZ6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC083843.3-201ENST00000623679 2186 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU4-79P-201ENST00000362764 141 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 Y_RNA.138-201ENST00000363462 102 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 Y_RNA.142-201ENST00000363491 102 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 Y_RNA.279-201ENST00000364763 95 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 Y_RNA.460-201ENST00000384255 102 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL357515.1-201ENST00000402967 542 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC013404.1-201ENST00000413068 249 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC109780.2-201ENST00000413467 845 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 RPL31P54-201ENST00000429803 370 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC005534.2-201ENST00000431047 433 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC006967.1-201ENST00000467608 589 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms