Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RN7SKP160-201ENST00000363804 340 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RNY4P16-201ENST00000364768 94 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AL122016.1-201ENST00000403365 367 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AL162578.1-201ENST00000406202 378 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 BTF3L4P3-201ENST00000418879 476 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RPS15AP12-201ENST00000419498 388 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RGS17P1-201ENST00000423358 553 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC009965.2-201ENST00000425328 970 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RPL35AP12-201ENST00000425362 338 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RPL23AP30-201ENST00000432419 501 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AL627308.1-201ENST00000435693 821 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 SLC25A18P1-201ENST00000449385 454 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 HMGB1P15-201ENST00000453854 435 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 MTCO2P29-201ENST00000465212 189 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 SIAH1P1-201ENST00000479411 923 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RN7SL547P-201ENST00000490793 290 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 GAPDHP56-201ENST00000506031 988 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 ATP5LP3-201ENST00000514223 304 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC093677.1-201ENST00000514414 678 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 BX510359.5-201ENST00000515651 304 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 SNORD60.2-201ENST00000516883 86 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 OR4R1P-201ENST00000529879 463 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AP000907.2-201ENST00000530827 353 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 MIR4504-201ENST00000577413 92 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC053481.3-201ENST00000577881 843 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AP005403.1-201ENST00000579720 229 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 RPL23AP92-201ENST00000603609 255 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC020910.2-201ENST00000603635 610 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AL356585.4-201ENST00000623078 1229 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AC097714.1-201ENST00000511272 1647 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 AL645937.1-201ENST00000641739 1652 ntBASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AL031595.2-201ENST00000624215 19071 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RNU6-74P-201ENST00000384235 107 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RN7SKP32-201ENST00000410167 303 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RPSAP35-201ENST00000413753 818 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RPL31P45-201ENST00000419532 356 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC234779.1-201ENST00000425910 285 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 OR2B7P-201ENST00000429302 934 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC099670.2-201ENST00000435130 321 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 MRPL50P4-201ENST00000446432 475 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC104651.2-201ENST00000447549 528 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC002553.2-201ENST00000453217 340 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RNU7-63P-201ENST00000459054 62 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms