Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 AC093249.1-201ENST00000567049 203 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 AC010547.6-201ENST00000571789 193 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 MIR7853-201ENST00000584820 132 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 AC004853.1-201ENST00000604902 698 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 AL354950.2-201ENST00000617939 290 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 AC073869.8-201ENST00000641806 335 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 MTND4P27-201ENST00000450813 1354 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 AC016745.2-201ENST00000608834 3443 ntBASIC5.13□□□□□ -1.59
NUP43Q8NFH3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP43Q8NFH3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC114546.3-201ENST00000623582 1734 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 Y_RNA.255-201ENST00000364581 97 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 RNU4-2-201ENST00000365668 141 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 RNA5SP284-201ENST00000384547 118 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 OR6E1P-201ENST00000414424 923 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 BMS1P17-202ENST00000416720 316 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC009161.1-201ENST00000417306 376 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AL645937.1-202ENST00000421799 937 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AL354766.1-201ENST00000423396 542 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC006548.1-201ENST00000427470 102 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 HMGB1P18-201ENST00000438801 619 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AP1S2P1-201ENST00000457344 379 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 HMGN2P26-201ENST00000463169 339 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 MRPS17P3-201ENST00000465453 385 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 RN7SL177P-201ENST00000476596 299 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 RPL7P42-201ENST00000481005 679 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 PPIAP19-201ENST00000486414 492 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 NRBF2P4-201ENST00000520874 850 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC112191.2-201ENST00000522428 333 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 OR4T1P-201ENST00000554933 911 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC005668.1-201ENST00000571142 476 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC012616.1-201ENST00000600294 197 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC010591.1-201ENST00000603941 649 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 Z98200.1-201ENST00000607298 470 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC010632.3-201ENST00000611377 369 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 CR392039.4-201ENST00000624968 501 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 CR381572.1-201ENST00000625098 102 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC134503.1-201ENST00000633048 54 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 HSPA8P18-201ENST00000439846 1928 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 RBPJP2-201ENST00000618187 1444 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 AC092447.10-201ENST00000620607 1652 ntBASIC5.12□□□□□ -1.59
NUP43Q8NFH3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP43Q8NFH3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP43Q8NFH3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms