Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SNORD17-201ENST00000390930 237 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 RNU6-55P-201ENST00000411092 107 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 RNU6-954P-201ENST00000411355 107 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC126124.2-201ENST00000413542 321 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 RPS29P4-201ENST00000414733 161 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AL357078.2-201ENST00000416486 427 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 BX842559.1-201ENST00000419615 532 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC023128.2-201ENST00000420880 1223 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 RPL23AP82-202ENST00000427528 469 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC092017.2-201ENST00000427600 362 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 GOT2P5-201ENST00000433995 546 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC007000.2-201ENST00000442564 487 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 MRPS31P2-201ENST00000451581 518 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 RPS4XP2-201ENST00000458402 793 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC108729.2-201ENST00000476543 840 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 SAP18P1-201ENST00000512058 390 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 CIR1P1-201ENST00000524055 1133 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AL161637.1-201ENST00000622380 412 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 MIR30E-201ENST00000362104 92 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 RNU4-35P-201ENST00000362588 141 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 RNU2-17P-201ENST00000410290 190 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 ARL5AP2-201ENST00000444698 533 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 CDC27P1-201ENST00000445384 715 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC069540.1-201ENST00000446320 988 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC089999.1-201ENST00000460336 374 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 FCF1P8-201ENST00000510322 597 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 OR8I1P-201ENST00000529291 931 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 OR4H6P-202ENST00000603819 340 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC018816.2-201ENST00000621460 353 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 FRG1DP-201ENST00000635586 771 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AL392088.2-201ENST00000637607 285 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 AC007256.1-201ENST00000392253 2765 ntBASIC3.78□□□□□ -1.8
CCDC65Q8IXS2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCDC65Q8IXS2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 MIR153-1-201ENST00000384914 90 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 MIR200C-201ENST00000384980 68 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 LIPT1P1-201ENST00000415870 1186 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AC091286.1-201ENST00000431233 461 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 MTCO1P43-201ENST00000431831 488 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 ELOCP11-201ENST00000436690 332 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 RPL7P29-201ENST00000437151 728 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AL513321.1-201ENST00000441175 761 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 ELOCP16-201ENST00000444494 332 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AC006539.3-201ENST00000454258 129 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AC112198.1-201ENST00000505369 1220 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 SOD1P3-201ENST00000518682 454 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 OR4R3P-201ENST00000525084 838 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms