Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 ERCC6-202ENST00000374127 1782 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 SNORD56.2-201ENST00000363242 71 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-853P-201ENST00000364306 107 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 MRPL42P2-201ENST00000403169 426 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AL023807.1-201ENST00000407932 359 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 MTND3P17-201ENST00000416968 344 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 RPL7P54-201ENST00000438336 674 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 SDCBPP1-201ENST00000440192 890 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC005297.2-201ENST00000450430 606 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 BX842559.2-201ENST00000451418 605 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 RPL7P15-201ENST00000461190 712 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AP000797.2-201ENST00000475768 606 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 RPS24P16-201ENST00000497294 392 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 IGBP1P4-201ENST00000503202 879 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC022861.1-201ENST00000522981 663 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 CENPUP1-201ENST00000526649 1202 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 ZNF705CP-201ENST00000530515 889 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC123904.2-201ENST00000548059 300 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AL512310.1-201ENST00000548639 172 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 LSM3P2-201ENST00000551246 273 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 SUB1P2-201ENST00000556401 297 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC018552.1-201ENST00000562099 811 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 MIR7853-201ENST00000584820 132 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC006116.3-201ENST00000592968 361 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 MIR7155-201ENST00000615925 56 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 AL049780.3-201ENST00000624612 1583 ntBASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM48Q8IWZ4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 Y_RNA.159-201ENST00000363674 87 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 Y_RNA.356-201ENST00000365475 113 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AL603766.1-201ENST00000407763 664 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC078974.1-201ENST00000411597 223 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AL133384.1-201ENST00000412744 351 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 MTND5P17-201ENST00000418405 1603 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RPL36AP36-201ENST00000418616 301 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC093162.1-201ENST00000419682 124 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RPS27P18-201ENST00000431701 247 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 GAPDHP58-201ENST00000438477 1006 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 HMGB3P12-201ENST00000438745 556 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RPL23AP20-201ENST00000447965 421 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC073850.1-201ENST00000449243 255 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC073136.1-201ENST00000449426 2884 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RPS20P32-201ENST00000456044 356 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-420P-201ENST00000458780 107 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RN7SL189P-201ENST00000468631 289 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC012123.2-201ENST00000485809 248 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AP001025.2-201ENST00000490908 477 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC023424.1-201ENST00000496058 459 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 FTH1P11-201ENST00000517577 551 ntBASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM48Q8IWZ4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms