Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC005498.1-201ENST00000592125 465 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AL009028.1-201ENST00000604895 802 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC243756.2-201ENST00000618406 463 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC024614.3-201ENST00000637860 256 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC000374.1-201ENST00000434698 1745 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 Y_RNA.160-201ENST00000363677 92 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 HMGB1P11-201ENST00000413899 637 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 MTCO1P20-201ENST00000425366 358 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 RPL37P21-201ENST00000435890 276 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC004938.1-201ENST00000438468 308 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 MTND1P18-201ENST00000448191 573 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 USP9YP12-201ENST00000450481 570 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC091685.2-201ENST00000454924 864 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 RPS20P24-201ENST00000457473 361 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 RPS3AP14-201ENST00000483907 780 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 RNU6-1153P-201ENST00000516760 105 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 SNORA18.6-201ENST00000516792 115 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AF235103.2-201ENST00000525753 346 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC008083.2-201ENST00000546707 476 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 POLR2KP1-201ENST00000553226 168 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AL442663.2-201ENST00000554385 511 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 EDDM3DP-201ENST00000554692 434 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AL133457.1-201ENST00000564251 987 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VRK3Q8IV63 MIR3667-201ENST00000581025 74 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 MIR4737-201ENST00000583979 81 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC112187.2-201ENST00000604345 283 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AP001836.1-201ENST00000604675 523 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC010200.2-201ENST00000605098 235 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AC091953.3-201ENST00000623220 236 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VRK3Q8IV63 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AP001642.1-201ENST00000624727 2117 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 OR5BR1P-201ENST00000524992 1330 ntBASIC4.67□□□□□ -1.66
VRK3Q8IV63 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VRK3Q8IV63 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VRK3Q8IV63 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.67□□□□□ -1.66
VRK3Q8IV63 AL442639.1-201ENST00000625030 1899 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VRK3Q8IV63 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VRK3Q8IV63 AL672167.1-205ENST00000641112 3080 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 RNU6-582P-201ENST00000362989 107 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 Y_RNA.279-201ENST00000364763 95 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 RNU6-1103P-201ENST00000384150 107 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 SNORD116-23-201ENST00000384645 92 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 AC025750.1-201ENST00000399891 379 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 RN7SKP100-201ENST00000411258 284 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 RPS3AP3-201ENST00000411933 242 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 AL450992.3-201ENST00000413192 568 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.66□□□□□ -1.66
VRK3Q8IV63 AL953862.1-201ENST00000423016 168 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 RPL7P57-201ENST00000423238 740 ntBASIC4.66□□□□□ -1.66
VRK3Q8IV63 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VRK3Q8IV63 FABP7P1-201ENST00000424004 391 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms