Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13CQ709C8 RNU6-482P-201ENST00000391068 107 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AL009174.1-201ENST00000426577 416 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 HMGN2P23-201ENST00000456759 269 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 AP000942.3-201ENST00000603702 160 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 MTND4P26-201ENST00000415971 1359 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 THAP12P8-201ENST00000447914 2115 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13CQ709C8 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 Z82217.1-201ENST00000625157 8149 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13CQ709C8 RANP7-201ENST00000418085 644 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 FAR1P1-201ENST00000427163 934 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 RPL23AP15-201ENST00000450202 459 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13CQ709C8 HNRNPKP5-201ENST00000515300 253 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13CQ709C8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
VPS13CQ709C8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13CQ709C8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13CQ709C8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
VPS13CQ709C8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13CQ709C8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS13CQ709C8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13CQ709C8 NPM1P29-201ENST00000483112 803 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 AL442163.2-201ENST00000553912 710 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 AC009063.1-201ENST00000563342 702 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 RMST_8.1-201ENST00000610287 165 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 AC019080.5-201ENST00000624891 757 ntBASIC2.28□□□□□ -2.04
VPS13CQ709C8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS13CQ709C8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VPS13CQ709C8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
VPS13CQ709C8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13CQ709C8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
VPS13CQ709C8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
VPS13CQ709C8 AP000926.3-201ENST00000497201 299 ntBASIC2.28□□□□□ -2.05
VPS13CQ709C8 RNA5SP148-201ENST00000516527 94 ntBASIC2.28□□□□□ -2.05
VPS13CQ709C8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
VPS13CQ709C8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.28□□□□□ -2.05
VPS13CQ709C8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.28□□□□□ -2.05
VPS13CQ709C8 AL355493.4-201ENST00000618530 292 ntBASIC2.28□□□□□ -2.05
VPS13CQ709C8 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.28□□□□□ -2.05
VPS13CQ709C8 AC125336.1-201ENST00000508893 2827 ntBASIC2.28□□□□□ -2.05
VPS13CQ709C8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13CQ709C8 RPL30P2-201ENST00000414021 291 ntBASIC2.27□□□□□ -2.05
VPS13CQ709C8 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC018634.1-201ENST00000437554 401 ntBASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 CTSLP2-204ENST00000629029 392 ntBASIC2.27□□□□□ -2.05
VPS13CQ709C8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13CQ709C8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 RNA5SP322-201ENST00000363617 119 ntBASIC2.27□□□□□ -2.05
VPS13CQ709C8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC005921.1-201ENST00000510589 286 ntBASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13CQ709C8 MIR1273D-201ENST00000577266 86 ntBASIC2.27□□□□□ -2.05
VPS13CQ709C8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13CQ709C8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13CQ709C8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13CQ709C8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 CACYBPP2-201ENST00000453625 678 ntBASIC2.27□□□□□ -2.05
VPS13CQ709C8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VPS13CQ709C8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 USP8P1-201ENST00000494673 3183 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 RPL21P132-201ENST00000331267 462 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 Y_RNA.118-201ENST00000363300 101 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 Y_RNA.164-201ENST00000363709 102 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 MIR518C-201ENST00000384822 101 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 HMGB1P16-201ENST00000447155 540 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 RNA5SP282-201ENST00000516355 108 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AL356490.1-201ENST00000623079 479 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC006020.1-201ENST00000420179 1854 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 NPM1P38-201ENST00000403835 865 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 Z98742.3-201ENST00000418637 326 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC073587.1-201ENST00000447093 876 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 UBTFL10-201ENST00000528532 562 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC087190.4-201ENST00000574616 8334 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC008725.1-201ENST00000605123 2263 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms