Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC009414.1-201ENST00000427200 443 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC006989.1-201ENST00000427212 131 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 CST9LP2-201ENST00000437612 320 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 SKP1P1-201ENST00000438081 489 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC112184.1-201ENST00000505179 312 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 RN7SKP272-201ENST00000516988 232 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 MIR1273D-201ENST00000577266 86 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC010680.4-201ENST00000605334 543 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 USP8P1-201ENST00000494673 3183 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 RNU6-14P-201ENST00000384630 106 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 ETF1P3-201ENST00000430422 1160 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 HMGN2P23-201ENST00000456759 269 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 uc_338.32-201ENST00000615087 172 ntBASIC2.79□□□□□ -1.96
RIF1Q5UIP0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC126124.2-201ENST00000413542 321 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC009963.1-201ENST00000417265 157 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC008280.2-201ENST00000455473 307 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 OR5G4P-201ENST00000525251 760 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 DPRXP4-201ENST00000578053 568 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC008725.1-201ENST00000605123 2263 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 OR4G1P-202ENST00000641173 1788 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 Y_RNA.338-201ENST00000365320 114 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.78□□□□□ -1.96
RIF1Q5UIP0 TRIM60P18-201ENST00000441518 828 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 RPS26P3-201ENST00000470205 348 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 RPL23AP70-201ENST00000483361 460 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 AC009063.1-201ENST00000563342 702 ntBASIC2.78□□□□□ -1.96
RIF1Q5UIP0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 ACTG1P13-201ENST00000486987 1043 ntBASIC2.77□□□□□ -1.97
RIF1Q5UIP0 AC108729.3-201ENST00000513484 108 ntBASIC2.77□□□□□ -1.97
RIF1Q5UIP0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 RPS4XP5-202ENST00000449995 1334 ntBASIC2.77□□□□□ -1.97
RIF1Q5UIP0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 RPL7P25-201ENST00000404151 721 ntBASIC2.77□□□□□ -1.97
RIF1Q5UIP0 RANP4-201ENST00000413361 655 ntBASIC2.77□□□□□ -1.97
RIF1Q5UIP0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.77□□□□□ -1.97
RIF1Q5UIP0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 AC091564.4-201ENST00000533934 2194 ntBASIC2.76□□□□□ -1.97
RIF1Q5UIP0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.76□□□□□ -1.97
RIF1Q5UIP0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 OR5H5P-201ENST00000503164 928 ntBASIC2.76□□□□□ -1.97
RIF1Q5UIP0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 MIR4781-201ENST00000585250 76 ntBASIC2.76□□□□□ -1.97
RIF1Q5UIP0 BNIP3P38-201ENST00000601117 544 ntBASIC2.76□□□□□ -1.97
RIF1Q5UIP0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 AL669942.2-201ENST00000620352 697 ntBASIC2.76□□□□□ -1.97
RIF1Q5UIP0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.76□□□□□ -1.97
RIF1Q5UIP0 PRDX3P4-201ENST00000470828 747 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms